Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 AC005294.1-201ENST00000355509 281 ntBASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 RNA5SP335-201ENST00000363817 110 ntBASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 MIR551A-201ENST00000385042 96 ntBASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 RN7SKP213-201ENST00000410746 298 ntBASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 HMGN2P27-201ENST00000427352 270 ntBASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 AL136231.1-201ENST00000429407 730 ntBASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 AC002553.2-201ENST00000453217 340 ntBASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 IGLV3-24-201ENST00000517477 197 ntBASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 AC078878.1-201ENST00000539832 958 ntBASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 SNORD39.2-201ENST00000579995 76 ntBASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 MIR4311-201ENST00000580794 100 ntBASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 AC024940.4-201ENST00000605507 246 ntBASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 AL136295.6-201ENST00000610486 658 ntBASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 AL139407.1-201ENST00000613826 1175 ntBASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 AC025574.2-201ENST00000615621 514 ntBASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 AC007938.2-201ENST00000604666 2634 ntBASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.53□□□□□ -1.52
TM9SF3Q9HD45 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 RPL7AP10-201ENST00000481016 791 ntBASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 RPSAP50-201ENST00000481955 852 ntBASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 RN7SL447P-201ENST00000494711 245 ntBASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 KATNBL1P4-201ENST00000503545 918 ntBASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 RPEP1-201ENST00000504507 658 ntBASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 RPS27AP18-201ENST00000515536 459 ntBASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 BLZF2P-201ENST00000553776 1130 ntBASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 AC022960.2-201ENST00000616300 666 ntBASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.52□□□□□ -1.53
TM9SF3Q9HD45 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 RPL23P2-201ENST00000320371 421 ntBASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 U8.4-201ENST00000363626 134 ntBASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 VN1R21P-201ENST00000426703 765 ntBASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 AC005033.1-201ENST00000428904 813 ntBASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 MTND2P40-201ENST00000436718 841 ntBASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 RPL12P3-201ENST00000440080 396 ntBASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 MEMO1P4-201ENST00000453590 386 ntBASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 MORF4L2P1-201ENST00000503761 858 ntBASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.51□□□□□ -1.53
TM9SF3Q9HD45 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms