Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 AL450023.1-201ENST00000450868 751 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 VDAC2P4-201ENST00000452925 711 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 YWHAEP1-201ENST00000453697 763 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 LDHBP2-201ENST00000456969 1005 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 IGBP1P4-201ENST00000503202 879 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 AC074087.1-201ENST00000512059 724 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 AC098976.1-201ENST00000513014 541 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 HMGN1P9-201ENST00000515212 298 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 RNA5SP230-201ENST00000517039 122 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 NRBF2P4-201ENST00000520874 850 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 MTND2P17-201ENST00000550281 688 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 OR11H3P-201ENST00000554547 982 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 NMNAT1P5-201ENST00000559657 841 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 PPATP2-201ENST00000605635 508 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 RNA5SP440-201ENST00000612665 119 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 AC135068.5-201ENST00000624197 983 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 AL078621.3-201ENST00000623707 2042 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 MTND4P21-201ENST00000453886 1357 ntBASIC5.63□□□□□ -1.51
PCDH9Q9HC56 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH9Q9HC56 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.62□□□□□ -1.51
PCDH9Q9HC56 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 MIR7-1-201ENST00000384871 110 ntBASIC5.62□□□□□ -1.51
PCDH9Q9HC56 SNORA17A-201ENST00000391185 133 ntBASIC5.62□□□□□ -1.51
PCDH9Q9HC56 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.62□□□□□ -1.51
PCDH9Q9HC56 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 TNPO1P1-201ENST00000423641 1138 ntBASIC5.62□□□□□ -1.51
PCDH9Q9HC56 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 FAR1P1-201ENST00000427163 934 ntBASIC5.62□□□□□ -1.51
PCDH9Q9HC56 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 AL389925.1-201ENST00000432257 728 ntBASIC5.62□□□□□ -1.51
PCDH9Q9HC56 AL691517.1-201ENST00000440833 1235 ntBASIC5.62□□□□□ -1.51
PCDH9Q9HC56 AC092106.1-201ENST00000444291 373 ntBASIC5.62□□□□□ -1.51
PCDH9Q9HC56 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 RN7SL273P-201ENST00000481561 299 ntBASIC5.62□□□□□ -1.51
PCDH9Q9HC56 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 TMEM97P2-201ENST00000517841 403 ntBASIC5.62□□□□□ -1.51
PCDH9Q9HC56 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 MIR4660-201ENST00000583549 74 ntBASIC5.62□□□□□ -1.51
PCDH9Q9HC56 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 AP000769.2-201ENST00000602344 396 ntBASIC5.62□□□□□ -1.51
PCDH9Q9HC56 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 SNORA17.5-201ENST00000630429 132 ntBASIC5.62□□□□□ -1.51
PCDH9Q9HC56 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 AP000473.2-201ENST00000602659 1537 ntBASIC5.62□□□□□ -1.51
PCDH9Q9HC56 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
PCDH9Q9HC56 AC004158.1-201ENST00000564508 4319 ntBASIC5.62□□□□□ -1.51
PCDH9Q9HC56 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms