Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AC027369.2-201ENST00000528030 440 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 CD24P2-201ENST00000565486 219 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AC025175.1-201ENST00000606482 759 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AC012557.1-201ENST00000607115 611 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AC009779.8-202ENST00000607990 932 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AL163051.2-201ENST00000618976 735 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AC083899.1-201ENST00000454465 3819 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AC004656.1-201ENST00000568479 4951 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 AC007996.1-201ENST00000620414 2821 ntBASIC5.47□□□□□ -1.53
BRF2Q9HAW0 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRF2Q9HAW0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
BRF2Q9HAW0 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
BRF2Q9HAW0 OR4F13P-202ENST00000560066 2054 ntBASIC5.46□□□□□ -1.53
BRF2Q9HAW0 LINC02019-201ENST00000608605 2060 ntBASIC5.46□□□□□ -1.53
BRF2Q9HAW0 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 RN7SKP185-201ENST00000362813 326 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 RNU6-249P-201ENST00000363016 102 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 RNU6-792P-201ENST00000363490 107 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 SUGT1P2-201ENST00000379452 992 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 AC004386.1-201ENST00000393214 761 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 ATP5HP3-201ENST00000396994 486 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 OR7E101P-201ENST00000400428 513 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 MIR1203-201ENST00000408812 85 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 UBE2V1P11-201ENST00000411559 285 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 AL035660.1-201ENST00000422041 222 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 AC138761.5-201ENST00000433967 325 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 RN7SL197P-201ENST00000466981 299 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 AC138866.2-201ENST00000508650 584 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 OR5H7P-201ENST00000514084 930 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 SCARNA6.1-201ENST00000516989 238 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 AC021678.3-201ENST00000517893 476 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 AC011853.1-201ENST00000518911 454 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 NPM1P35-201ENST00000533043 868 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 AC011472.4-201ENST00000615848 491 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 SAMMSON-209ENST00000641222 1100 ntBASIC5.46□□□□□ -1.54
BRF2Q9HAW0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.46□□□□□ -1.54
BRF2Q9HAW0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
BRF2Q9HAW0 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms