Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 RNA5SP92-201ENST00000516437 110 ntBASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 PRPF19P1-201ENST00000584766 898 ntBASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 MTCO1P1-201ENST00000624263 1081 ntBASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
UPF3BQ9BZI7 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.4
UPF3BQ9BZI7 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
UPF3BQ9BZI7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 RN7SKP125-201ENST00000410481 302 ntBASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 REREP1Y-201ENST00000422655 198 ntBASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 AC090018.1-201ENST00000434369 367 ntBASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 REREP2Y-201ENST00000439103 200 ntBASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 AC104634.1-201ENST00000452720 462 ntBASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 RPL35AP19-201ENST00000469425 329 ntBASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 RN7SL184P-201ENST00000488308 297 ntBASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 AC016559.2-201ENST00000510759 359 ntBASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 NPM1P21-201ENST00000513394 762 ntBASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 BLZF2P-201ENST00000553776 1130 ntBASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 IMMP1LP3-201ENST00000604197 224 ntBASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 AC008115.4-201ENST00000619780 775 ntBASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 MIR6839-201ENST00000620425 113 ntBASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
UPF3BQ9BZI7 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 AP005435.3-201ENST00000531260 3198 ntBASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 RNU6-171P-201ENST00000384354 107 ntBASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 RNA5SP187-201ENST00000384400 119 ntBASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 PRPF38AP1-201ENST00000451976 933 ntBASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 CBX1P5-201ENST00000475330 559 ntBASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 AP000797.2-201ENST00000475768 606 ntBASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 DEFB109A-201ENST00000482450 265 ntBASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 AC004815.1-201ENST00000484185 331 ntBASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 RPL7P41-201ENST00000485823 957 ntBASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 AC147055.3-201ENST00000510547 851 ntBASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 SNORA70.11-201ENST00000515987 138 ntBASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 SNORA70.13-201ENST00000516116 138 ntBASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 AC090286.3-201ENST00000573133 187 ntBASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 RPSAP73-201ENST00000614820 330 ntBASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 AC109583.2-201ENST00000617367 129 ntBASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 AC091932.2-201ENST00000623014 291 ntBASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.32□□□□□ -1.4
UPF3BQ9BZI7 AC010266.2-201ENST00000564741 3255 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 AC005005.4-201ENST00000623789 16698 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 AC103591.2-201ENST00000265259 766 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 RNA5SP507-201ENST00000363603 121 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 MIR223-201ENST00000385204 110 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 PEX12P1-201ENST00000400284 1048 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 RPA2P2-201ENST00000419698 796 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 RPL21P133-201ENST00000443666 476 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 AC091685.2-201ENST00000454924 864 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 RPL7P39-201ENST00000481157 744 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 RN7SL727P-201ENST00000482164 296 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 RN7SL814P-201ENST00000487715 300 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms