Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RPAP1Q9BWH6 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
RPAP1Q9BWH6 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RPAP1Q9BWH6 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 RPS26P13-201ENST00000419030 330 ntBASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 RPS11P7-201ENST00000442125 465 ntBASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 IGBP1P4-201ENST00000503202 879 ntBASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 IMPA1P1-201ENST00000510718 842 ntBASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 RN7SKP66-201ENST00000516681 231 ntBASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 RNA5SP230-201ENST00000517039 122 ntBASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 RNA5SP373-201ENST00000517271 95 ntBASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 RN7SL290P-201ENST00000578661 300 ntBASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 AL022394.1-201ENST00000606979 292 ntBASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 AC016542.2-201ENST00000624201 619 ntBASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RPAP1Q9BWH6 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 RNU1-43P-201ENST00000365052 165 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 SETP9-201ENST00000423837 832 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AC108161.1-201ENST00000461060 402 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AC092754.1-201ENST00000472975 479 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AP000797.2-201ENST00000475768 606 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AC110775.1-201ENST00000513721 462 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AP001922.4-201ENST00000526967 290 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 HIGD1AP5-201ENST00000529959 259 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AP004607.2-201ENST00000533949 322 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AC127381.1-201ENST00000555979 939 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 OR1F2P-201ENST00000570470 933 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 MIR4436B2-201ENST00000581415 91 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 MIR4436B1-201ENST00000583272 91 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 MAPK10-328ENST00000641553 4009 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 RNU1-146P-201ENST00000364015 165 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 HSPD1P12-201ENST00000429127 1069 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AL772161.1-201ENST00000439130 476 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 MORF4L1P4-201ENST00000450245 976 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 CBX1P2-201ENST00000453841 458 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AC090114.3-201ENST00000479267 829 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 NPM1P28-201ENST00000492269 840 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 AC011447.4-201ENST00000587562 111 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 MIR6820-201ENST00000611508 62 ntBASIC6.44□□□□□ -1.38
RPAP1Q9BWH6 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RPAP1Q9BWH6 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.43□□□□□ -1.38
RPAP1Q9BWH6 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.43□□□□□ -1.38
RPAP1Q9BWH6 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.43□□□□□ -1.38
RPAP1Q9BWH6 AC125336.1-201ENST00000508893 2827 ntBASIC6.43□□□□□ -1.38
RPAP1Q9BWH6 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RPAP1Q9BWH6 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.43□□□□□ -1.38
RPAP1Q9BWH6 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RPAP1Q9BWH6 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms