Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AP002373.2-201ENST00000541631 1060 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 APOOP5-202ENST00000564761 566 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 AL078601.3-201ENST00000573303 535 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 RN7SL664P-201ENST00000584239 305 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 MIR6872-201ENST00000612981 62 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 CU634019.6-201ENST00000623165 710 ntTSL 5 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 MAGOHB-211ENST00000625272 319 ntTSL 3 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 AC068205.4-201ENST00000637880 804 ntBASIC7.38□□□□□ -1.23
USB1Q9BQ65 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USB1Q9BQ65 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
USB1Q9BQ65 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 EIF3H-201ENST00000276682 2041 ntTSL 2 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 EEF1A1P10-201ENST00000475365 1390 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC016582.1-202ENST00000636341 2982 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 RNU1-47P-201ENST00000362966 163 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 RNA5SP336-201ENST00000364189 117 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 TDGF1P4-201ENST00000401555 520 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 AL359634.1-202ENST00000404721 284 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 LINC01644-201ENST00000405369 984 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 RNU4-26P-201ENST00000410270 107 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 RNU6-272P-201ENST00000411028 104 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 RN7SKP108-201ENST00000411367 328 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 RPS12P24-201ENST00000412619 387 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 LINC00426-202ENST00000417079 1045 ntTSL 3 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 KRT18P53-201ENST00000431919 117 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 WDR82P1-201ENST00000439836 939 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 SLC25A18P1-201ENST00000449385 454 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 AL365436.1-201ENST00000452587 495 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 RN7SL757P-201ENST00000466709 301 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 SLC25A51P1-201ENST00000468432 871 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 RN7SL862P-201ENST00000491550 298 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 HMGB1P30-201ENST00000492455 606 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 RN7SL569P-201ENST00000494652 288 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC025164.1-201ENST00000496249 478 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 MYL5-205ENST00000505477 584 ntTSL 3 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 RN7SKP190-201ENST00000516079 286 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC021001.1-201ENST00000518703 987 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 IGKV2D-10-201ENST00000520194 281 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC022616.3-201ENST00000523940 148 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 PGAM1P8-201ENST00000526979 453 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 PTP4A1P6-201ENST00000531034 478 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC123904.2-201ENST00000548059 300 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 JPT1-211ENST00000581874 517 ntTSL 5 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 LINC00674-202ENST00000590734 160 ntBASIC7.37□□□□□ -1.23
USB1Q9BQ65 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC7.37□□□□□ -1.23
USB1Q9BQ65 AC245389.1-201ENST00000605141 529 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms