Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX3Q99909 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.86□□□□□ -1.63
SSX3Q99909 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX3Q99909 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
SSX3Q99909 PDCL3P4-201ENST00000489621 720 ntBASIC4.86□□□□□ -1.63
SSX3Q99909 RN7SL193P-201ENST00000491708 276 ntBASIC4.86□□□□□ -1.63
SSX3Q99909 Y_RNA.667-201ENST00000516212 107 ntBASIC4.86□□□□□ -1.63
SSX3Q99909 RNA5SP438-201ENST00000516561 112 ntBASIC4.86□□□□□ -1.63
SSX3Q99909 MTCYBP19-201ENST00000517463 1124 ntBASIC4.86□□□□□ -1.63
SSX3Q99909 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX3Q99909 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX3Q99909 AC022826.1-201ENST00000519383 805 ntBASIC4.86□□□□□ -1.63
SSX3Q99909 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX3Q99909 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX3Q99909 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX3Q99909 AL390726.5-202ENST00000564800 256 ntBASIC4.86□□□□□ -1.63
SSX3Q99909 ZNF322P1-201ENST00000568013 1209 ntBASIC4.86□□□□□ -1.63
SSX3Q99909 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX3Q99909 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX3Q99909 AC233702.9-201ENST00000581528 203 ntBASIC4.86□□□□□ -1.63
SSX3Q99909 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX3Q99909 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.86□□□□□ -1.63
SSX3Q99909 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX3Q99909 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX3Q99909 MIR6793-201ENST00000612376 63 ntBASIC4.86□□□□□ -1.63
SSX3Q99909 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.86□□□□□ -1.63
SSX3Q99909 LINC00216-201ENST00000623548 1126 ntBASIC4.86□□□□□ -1.63
SSX3Q99909 SNX18P12-201ENST00000624821 759 ntBASIC4.86□□□□□ -1.63
SSX3Q99909 AC019080.5-201ENST00000624891 757 ntBASIC4.86□□□□□ -1.63
SSX3Q99909 AL357562.1-201ENST00000624911 609 ntBASIC4.86□□□□□ -1.63
SSX3Q99909 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX3Q99909 AC004808.2-201ENST00000627965 773 ntBASIC4.86□□□□□ -1.63
SSX3Q99909 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.86□□□□□ -1.63
SSX3Q99909 AC129915.3-201ENST00000634128 948 ntBASIC4.86□□□□□ -1.63
SSX3Q99909 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSX3Q99909 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSX3Q99909 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX3Q99909 AC114774.1-201ENST00000507410 1770 ntBASIC4.86□□□□□ -1.63
SSX3Q99909 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSX3Q99909 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSX3Q99909 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX3Q99909 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSX3Q99909 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SSX3Q99909 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX3Q99909 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX3Q99909 AL589826.1-201ENST00000340697 249 ntBASIC4.85□□□□□ -1.63
SSX3Q99909 MIR421-201ENST00000365696 85 ntBASIC4.85□□□□□ -1.63
SSX3Q99909 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SSX3Q99909 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SSX3Q99909 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX3Q99909 AC093719.1-202ENST00000392735 373 ntBASIC4.85□□□□□ -1.63
SSX3Q99909 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX3Q99909 RPA2P2-201ENST00000419698 796 ntBASIC4.85□□□□□ -1.63
SSX3Q99909 AL512593.1-201ENST00000444758 779 ntBASIC4.85□□□□□ -1.63
SSX3Q99909 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX3Q99909 AL354710.1-201ENST00000453641 246 ntBASIC4.85□□□□□ -1.63
SSX3Q99909 PSMC1P13-201ENST00000458195 985 ntBASIC4.85□□□□□ -1.63
SSX3Q99909 AC084754.1-201ENST00000463466 464 ntBASIC4.85□□□□□ -1.63
SSX3Q99909 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.85□□□□□ -1.63
SSX3Q99909 AC025181.1-201ENST00000477507 416 ntBASIC4.85□□□□□ -1.63
SSX3Q99909 TRBV5-2-201ENST00000489095 273 ntBASIC4.85□□□□□ -1.63
SSX3Q99909 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX3Q99909 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSX3Q99909 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX3Q99909 AC114781.3-201ENST00000512083 142 ntBASIC4.85□□□□□ -1.63
SSX3Q99909 AC108471.1-201ENST00000513977 287 ntBASIC4.85□□□□□ -1.63
SSX3Q99909 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.85□□□□□ -1.63
SSX3Q99909 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SSX3Q99909 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.85□□□□□ -1.63
SSX3Q99909 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX3Q99909 AC068305.2-201ENST00000550567 1205 ntBASIC4.85□□□□□ -1.63
SSX3Q99909 SNRPGP1-201ENST00000553864 222 ntBASIC4.85□□□□□ -1.63
SSX3Q99909 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX3Q99909 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX3Q99909 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX3Q99909 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSX3Q99909 AC092121.1-201ENST00000569452 202 ntBASIC4.85□□□□□ -1.63
SSX3Q99909 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX3Q99909 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX3Q99909 MIR132-201ENST00000591554 101 ntBASIC4.85□□□□□ -1.63
SSX3Q99909 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.85□□□□□ -1.63
SSX3Q99909 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX3Q99909 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX3Q99909 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX3Q99909 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX3Q99909 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX3Q99909 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX3Q99909 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX3Q99909 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SSX3Q99909 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX3Q99909 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SSX3Q99909 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX3Q99909 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SSX3Q99909 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX3Q99909 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSX3Q99909 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX3Q99909 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSX3Q99909 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.84□□□□□ -1.63
SSX3Q99909 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSX3Q99909 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms