Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RN7SKP81-201ENST00000365603 331 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 PSMA6P1-201ENST00000400275 741 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 AL449283.1-202ENST00000418249 604 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 USP9YP21-201ENST00000420603 432 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 OR5M12P-201ENST00000423388 929 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 AC073143.1-201ENST00000436316 395 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 AL590004.3-202ENST00000445883 451 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 BUD31P2-201ENST00000449374 300 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 RPL23AP60-201ENST00000450011 454 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 ZNF886P-201ENST00000450781 723 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 FRG2FP-204ENST00000453982 852 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 snoU109.5-201ENST00000516231 132 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 AC007346.2-201ENST00000564816 892 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 MIR4502-201ENST00000580432 81 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 AC005244.1-201ENST00000582566 339 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 AP005136.2-201ENST00000583253 1049 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 MIR4420-201ENST00000583944 77 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 AC008521.2-201ENST00000591021 259 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 RFPL4AP6-201ENST00000616792 846 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 AC016769.4-201ENST00000616893 535 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 AL355974.3-201ENST00000617383 467 ntBASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHAMP1Q96JM3 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
CHAMP1Q96JM3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
CHAMP1Q96JM3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CHAMP1Q96JM3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.9□□□□□ -1.31
CHAMP1Q96JM3 AC007998.4-201ENST00000612496 2533 ntBASIC6.9□□□□□ -1.31
CHAMP1Q96JM3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CHAMP1Q96JM3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CHAMP1Q96JM3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
CHAMP1Q96JM3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CHAMP1Q96JM3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CHAMP1Q96JM3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CHAMP1Q96JM3 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 RNU105B-201ENST00000364478 208 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 SNORD116-1-201ENST00000384335 95 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 AL512422.1-201ENST00000407033 553 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 UBE2V1P11-201ENST00000411559 285 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 AC016907.1-201ENST00000419483 435 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 DEFB130D-201ENST00000426866 237 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 RPL6P30-201ENST00000443382 862 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 AC004129.2-201ENST00000457229 287 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 RPSAP37-201ENST00000470913 821 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 RN7SL174P-201ENST00000475578 289 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 RPL23AP40-201ENST00000487630 390 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 TPT1P3-201ENST00000492841 512 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 AC021087.2-201ENST00000504656 1203 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 AC093815.1-201ENST00000508637 280 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 AC021193.1-201ENST00000511607 420 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 HSD3BP3-201ENST00000514706 994 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 AC136777.2-201ENST00000522979 358 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 AC090424.1-201ENST00000535243 736 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 OR1E3-201ENST00000575608 948 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 AC107993.1-201ENST00000591343 684 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 AP004372.1-201ENST00000604842 844 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 AL357562.1-201ENST00000624911 609 ntBASIC6.89□□□□□ -1.31
CHAMP1Q96JM3 AC017037.3-201ENST00000625016 472 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms