Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.68□□□□□ -1.34
ERCC4Q92889 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.68□□□□□ -1.34
ERCC4Q92889 AC025857.2-201ENST00000602711 238 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 AC002069.2-201ENST00000603580 883 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 AL645933.2-201ENST00000606743 1207 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 AC021755.4-201ENST00000616620 456 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 AL355974.3-201ENST00000617383 467 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 RNA5SP439-201ENST00000617595 124 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.68□□□□□ -1.34
ERCC4Q92889 AL512652.1-201ENST00000619006 500 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
ERCC4Q92889 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC4Q92889 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.68□□□□□ -1.34
ERCC4Q92889 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC4Q92889 AP005435.3-201ENST00000531260 3198 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC4Q92889 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
ERCC4Q92889 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC4Q92889 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC4Q92889 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC4Q92889 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.68□□□□□ -1.34
ERCC4Q92889 MTND4P8-201ENST00000514997 1362 ntBASIC6.68□□□□□ -1.34
ERCC4Q92889 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.68□□□□□ -1.34
ERCC4Q92889 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ERCC4Q92889 CASC19-260ENST00000641828 2001 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
ERCC4Q92889 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC4Q92889 AC027279.4-201ENST00000624371 2072 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC4Q92889 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC4Q92889 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
ERCC4Q92889 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC4Q92889 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC4Q92889 RNU6-252P-201ENST00000363232 107 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC4Q92889 RNU6-481P-201ENST00000384194 107 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 MYL6P5-201ENST00000412707 459 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.67□□□□□ -1.34
ERCC4Q92889 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.67□□□□□ -1.34
ERCC4Q92889 KRR1P1-201ENST00000419430 803 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 AL160175.1-201ENST00000428124 247 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 KRT8P51-201ENST00000438938 274 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.67□□□□□ -1.34
ERCC4Q92889 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.67□□□□□ -1.34
ERCC4Q92889 AC097359.1-201ENST00000447946 463 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 OSTCP1-201ENST00000455507 450 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 Z83838.1-202ENST00000456225 839 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.67□□□□□ -1.34
ERCC4Q92889 NDUFA5P9-201ENST00000472609 340 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC4Q92889 MTND4LP2-201ENST00000502312 285 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.67□□□□□ -1.34
ERCC4Q92889 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC6.67□□□□□ -1.34
ERCC4Q92889 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.67□□□□□ -1.34
ERCC4Q92889 AC126615.2-201ENST00000553003 515 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC6.67□□□□□ -1.34
ERCC4Q92889 AC121758.1-202ENST00000556917 658 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.67□□□□□ -1.34
ERCC4Q92889 AC010735.1-201ENST00000567305 1026 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 AC023824.3-201ENST00000569003 562 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 TXNP4-201ENST00000575018 310 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.67□□□□□ -1.34
ERCC4Q92889 MIR6780B-201ENST00000610307 79 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 AC100847.1-201ENST00000611316 481 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.67□□□□□ -1.34
ERCC4Q92889 AL596275.2-207ENST00000641188 675 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
ERCC4Q92889 MFSD8-219ENST00000641228 2559 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.67□□□□□ -1.34
ERCC4Q92889 NF1-214ENST00000490416 1329 ntTSL 3 BASIC6.67□□□□□ -1.34
ERCC4Q92889 AL355578.1-201ENST00000607405 1328 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.67□□□□□ -1.34
ERCC4Q92889 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.67□□□□□ -1.34
ERCC4Q92889 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC4Q92889 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC4Q92889 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC4Q92889 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
ERCC4Q92889 AC093909.5-201ENST00000621839 1799 ntBASIC6.67□□□□□ -1.34
ERCC4Q92889 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ERCC4Q92889 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
ERCC4Q92889 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.66□□□□□ -1.34
ERCC4Q92889 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ERCC4Q92889 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.66□□□□□ -1.34
ERCC4Q92889 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ERCC4Q92889 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
ERCC4Q92889 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.66□□□□□ -1.34
ERCC4Q92889 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ERCC4Q92889 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.66□□□□□ -1.34
ERCC4Q92889 RNU6-796P-201ENST00000391086 107 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ERCC4Q92889 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC6.66□□□□□ -1.34
ERCC4Q92889 RNU2-18P-201ENST00000411224 162 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.66□□□□□ -1.34
ERCC4Q92889 TATDN1P1-201ENST00000414123 891 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.66□□□□□ -1.34
ERCC4Q92889 TXNL1P1-201ENST00000429528 554 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.66□□□□□ -1.34
ERCC4Q92889 RPS6P15-201ENST00000431996 751 ntBASIC6.66□□□□□ -1.34
ERCC4Q92889 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.66□□□□□ -1.34
ERCC4Q92889 USP9YP24-201ENST00000434374 697 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms