Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC073869.7-201ENST00000640874 297 ntBASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 RNA5SP46-201ENST00000362370 120 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 DBIP1-201ENST00000401435 260 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 SLC20A1P1-201ENST00000413906 956 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 OR6E1P-201ENST00000414424 923 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 Z93019.1-201ENST00000416450 973 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 AL389925.1-201ENST00000432257 728 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 GSTM5P1-201ENST00000434751 660 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 AC019185.1-201ENST00000442718 389 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 MTCO1P46-201ENST00000451639 1491 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 PROS2P-201ENST00000474651 1951 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 RN7SL273P-201ENST00000481561 299 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 AC022133.1-201ENST00000490961 571 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 RPS12P31-201ENST00000491419 398 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 PFN1P8-201ENST00000497012 543 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 AC090638.1-201ENST00000498296 909 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 IMPA1P1-201ENST00000510718 842 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 BNIP3P1-201ENST00000547295 580 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 LINC01963-201ENST00000562038 3148 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 AC100767.2-201ENST00000604840 693 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 AL512356.3-201ENST00000623005 461 ntBASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC50Q8IVM0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 AP005432.1-201ENST00000580891 3485 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 OR9G4-201ENST00000302957 984 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 AC093155.2-201ENST00000420734 937 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 TNPO1P1-201ENST00000423641 1138 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 KCTD9P1-201ENST00000430462 1167 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 SUMO2P3-201ENST00000438311 288 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 CYCSP24-201ENST00000445119 316 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 AL672138.1-201ENST00000450604 1015 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 AL591473.1-201ENST00000464297 313 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 SNORD46.2-201ENST00000516021 102 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 NRBF2P4-201ENST00000520874 850 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 AC112191.2-201ENST00000522428 333 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 AP004607.2-201ENST00000533949 322 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 RN7SL356P-201ENST00000582228 248 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 PRPF19P1-201ENST00000584766 898 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 AC027243.2-201ENST00000602530 724 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 AC022106.2-201ENST00000620114 757 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 AC132068.1-201ENST00000623805 459 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 AP003400.3-201ENST00000624904 346 ntBASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC50Q8IVM0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms