Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AL096803.2-201ENST00000450032 677 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 HMGB1P5-202ENST00000451497 985 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 Z95152.1-201ENST00000453556 656 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 RPS27AP16-201ENST00000492222 470 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AC090958.1-201ENST00000511122 351 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 CYCSP25-201ENST00000525280 316 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 OR8Q1P-201ENST00000526467 655 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 TDGP1-201ENST00000543961 1229 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 RN7SL622P-201ENST00000585292 275 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 BNIP3P24-201ENST00000593398 557 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AC063977.7-201ENST00000594454 337 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AC008555.7-201ENST00000605008 583 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 PART1_2.1-201ENST00000612397 250 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 RNA5SP439-201ENST00000617595 124 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AC104985.3-201ENST00000623479 597 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AC099654.15-201ENST00000639802 509 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AC079776.5-201ENST00000641920 211 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 AF287957.1-201ENST00000607368 1595 ntBASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD4Q6ZW05 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 AL353796.1-201ENST00000561542 3241 ntBASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 AC107021.2-201ENST00000567714 2095 ntBASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 RLIMP2-201ENST00000427891 1563 ntBASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 YWHAZP4-201ENST00000392459 708 ntBASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 MYL6P5-201ENST00000412707 459 ntBASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 USP9YP21-201ENST00000420603 432 ntBASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 AC005189.1-201ENST00000431286 310 ntBASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 MTND2P22-201ENST00000444325 1033 ntBASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 AC092601.1-201ENST00000444526 383 ntBASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 POU5F1P5-201ENST00000445059 658 ntBASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 AL445991.1-201ENST00000450381 475 ntBASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 HIGD1AP16-201ENST00000450986 258 ntBASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 CST12P-201ENST00000457644 362 ntBASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTCHD4Q6ZW05 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms