Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 GPS2P1-201ENST00000411761 986 ntBASIC5.08□□□□□ -1.6
RTL4Q6ZR62 GTF3AP1-201ENST00000416942 1004 ntBASIC5.08□□□□□ -1.6
RTL4Q6ZR62 NDUFB4P8-201ENST00000435351 367 ntBASIC5.08□□□□□ -1.6
RTL4Q6ZR62 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 CBX1P2-201ENST00000453841 458 ntBASIC5.08□□□□□ -1.6
RTL4Q6ZR62 RPS4XP12-201ENST00000461747 709 ntBASIC5.08□□□□□ -1.6
RTL4Q6ZR62 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 RPL7P39-201ENST00000481157 744 ntBASIC5.08□□□□□ -1.6
RTL4Q6ZR62 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.08□□□□□ -1.6
RTL4Q6ZR62 OR5AM1P-201ENST00000532136 1032 ntBASIC5.08□□□□□ -1.6
RTL4Q6ZR62 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 AP005262.1-201ENST00000582646 997 ntBASIC5.08□□□□□ -1.6
RTL4Q6ZR62 AL162574.1-201ENST00000615702 950 ntBASIC5.08□□□□□ -1.6
RTL4Q6ZR62 MIR6837-201ENST00000620884 64 ntBASIC5.08□□□□□ -1.6
RTL4Q6ZR62 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 AC068870.1-201ENST00000563737 2455 ntBASIC5.08□□□□□ -1.6
RTL4Q6ZR62 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.08□□□□□ -1.6
RTL4Q6ZR62 BTBD10P1-201ENST00000549824 1352 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 CR788268.1-201ENST00000603931 1809 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 AC005522.1-201ENST00000395416 346 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 SNORA79B-201ENST00000410557 148 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 AC007161.1-204ENST00000423039 460 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 AC009784.1-201ENST00000426484 460 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 CFL1P1-202ENST00000432948 411 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 AC073465.2-201ENST00000440938 498 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 RPS26P39-201ENST00000469206 341 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 RN7SL214P-201ENST00000487317 265 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 COX6B1P2-201ENST00000489624 230 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 RFPL4AP5-201ENST00000514977 504 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 RNU6-513P-201ENST00000516104 104 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 AC079064.1-201ENST00000528365 362 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 AC078878.1-201ENST00000539832 958 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 AL358913.1-201ENST00000554342 121 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 SUMO2P15-201ENST00000604285 278 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 AL512624.1-201ENST00000613638 469 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 uc_338.7-201ENST00000621834 124 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 AC104260.2-201ENST00000623551 3497 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 Z83820.1-201ENST00000456978 1499 ntBASIC5.07□□□□□ -1.6
RTL4Q6ZR62 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
RTL4Q6ZR62 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RTL4Q6ZR62 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.06□□□□□ -1.6
RTL4Q6ZR62 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms