Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC074141.1-201ENST00000588129 2995 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 DDX43P1-201ENST00000510713 1763 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AC009135.2-201ENST00000624136 1768 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 VTRNA3-1P-201ENST00000362552 102 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 RNU5A-6P-201ENST00000384136 116 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AL079342.2-201ENST00000403367 482 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 PNRC2P1-201ENST00000423940 420 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 OR4F13P-201ENST00000428478 931 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AC239367.3-201ENST00000428996 814 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AC098824.1-201ENST00000453565 980 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 OR6K1P-201ENST00000456766 971 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AC022483.1-201ENST00000514020 567 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 RNU6-358P-201ENST00000516564 75 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 SNORA81.2-201ENST00000516868 170 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AC023632.1-201ENST00000518463 375 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 IGLVIV-64-201ENST00000518581 301 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 NANOGNBP2-201ENST00000544753 553 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 MYL2-203ENST00000548438 664 ntTSL 3 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 ULK4P1-202ENST00000565174 503 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AP001437.1-201ENST00000608783 456 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AC090574.1-201ENST00000623186 233 ntBASIC8.49□□□□□ -1.05
RC3H1Q5TC82 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RC3H1Q5TC82 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 Y_RNA.460-201ENST00000384255 102 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 RPL9P21-201ENST00000392269 505 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AL354751.2-201ENST00000415471 210 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 SDCBPP3-201ENST00000419629 891 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AL354707.3-201ENST00000427308 331 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 HSPD1P12-201ENST00000429127 1069 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 RPL7P36-201ENST00000444633 681 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 PPIAP20-201ENST00000449839 135 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 OR51B8P-201ENST00000449892 769 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 MTND6P6-201ENST00000478031 263 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 RPL7P18-201ENST00000478965 734 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 PFN2-209ENST00000481275 560 ntTSL 4 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AC109462.1-201ENST00000491087 368 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 RNF138P1-201ENST00000502765 546 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AC147055.4-201ENST00000504399 745 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AC055733.3-201ENST00000505214 523 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 HMGN1P13-201ENST00000505795 138 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 ODF1-202ENST00000518835 368 ntTSL 3 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 IGKV1OR22-1-201ENST00000521497 360 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 MTCO3P15-201ENST00000526563 574 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AC022690.1-201ENST00000526681 550 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 RGS5-219ENST00000528019 512 ntTSL 4 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AC008055.1-201ENST00000547032 609 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AC090826.1-203ENST00000569235 490 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AC010463.3-201ENST00000594077 500 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AL360085.1-201ENST00000604713 532 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AP000894.4-201ENST00000610185 483 ntBASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC8.48□□□□□ -1.05
RC3H1Q5TC82 AC073488.9-201ENST00000631601 754 ntBASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 256.3 ms