Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC022106.2-201ENST00000620114 757 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 SSXP3-201ENST00000442971 1300 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 SRRM1P3-201ENST00000426911 2678 ntBASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
HIST1H1AQ02539 AC106872.5-201ENST00000508856 1416 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 AL513548.1-201ENST00000562904 1724 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 OR52B3P-201ENST00000314715 928 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 RN7SKP275-201ENST00000364626 301 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 AC007618.1-201ENST00000366455 732 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 OR1L6-202ENST00000373684 1044 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 MIR551A-201ENST00000385042 96 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 RPL10P10-201ENST00000403509 664 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 RN7SKP240-201ENST00000410583 375 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 AC017019.1-201ENST00000426129 261 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 BX119321.1-201ENST00000428912 797 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 RPL19P16-201ENST00000433839 588 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 AP000547.1-201ENST00000454360 617 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 AL591473.1-201ENST00000464297 313 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 UBFD1P1-201ENST00000473259 814 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 RN7SKP99-201ENST00000517028 307 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 AC022882.1-201ENST00000532142 501 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 BNIP3P1-201ENST00000547295 580 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 AC040958.1-201ENST00000561102 201 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 MIR4271-201ENST00000582451 67 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 AC079315.1-201ENST00000602952 623 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 AC025574.2-201ENST00000615621 514 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 AC022417.1-201ENST00000624768 1303 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 AC114947.2-201ENST00000565748 2125 ntBASIC4.12□□□□□ -1.75
HIST1H1AQ02539 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.12□□□□□ -1.75
HIST1H1AQ02539 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AC100757.1-201ENST00000616872 1835 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 Z83820.1-201ENST00000456978 1499 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AL022393.1-201ENST00000625142 1677 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 OR7E25P-201ENST00000344844 931 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AC023490.2-201ENST00000359859 470 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 RNA5SP394-201ENST00000364216 119 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 COX5BP7-201ENST00000414780 274 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AL358176.3-201ENST00000420757 454 ntBASIC4.11□□□□□ -1.75
HIST1H1AQ02539 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.11□□□□□ -1.75
HIST1H1AQ02539 HSPD1P12-201ENST00000429127 1069 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms