Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VSX2P58304 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VSX2P58304 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VSX2P58304 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VSX2P58304 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VSX2P58304 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
VSX2P58304 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VSX2P58304 AC003973.3-201ENST00000624863 2822 ntBASIC5.12□□□□□ -1.59
VSX2P58304 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VSX2P58304 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VSX2P58304 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VSX2P58304 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
VSX2P58304 AC005294.1-201ENST00000355509 281 ntBASIC5.12□□□□□ -1.59
VSX2P58304 RNA5SP183-201ENST00000362452 119 ntBASIC5.12□□□□□ -1.59
VSX2P58304 RN7SKP145-201ENST00000363291 303 ntBASIC5.12□□□□□ -1.59
VSX2P58304 U3.7-201ENST00000363668 216 ntBASIC5.12□□□□□ -1.59
VSX2P58304 SNORA67-201ENST00000384423 137 ntBASIC5.12□□□□□ -1.59
VSX2P58304 MIR105-1-201ENST00000385222 81 ntBASIC5.12□□□□□ -1.59
VSX2P58304 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VSX2P58304 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
VSX2P58304 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.12□□□□□ -1.59
VSX2P58304 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.12□□□□□ -1.59
VSX2P58304 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.12□□□□□ -1.59
VSX2P58304 HMGN2P27-201ENST00000427352 270 ntBASIC5.12□□□□□ -1.59
VSX2P58304 BRWD1P3-201ENST00000428816 390 ntBASIC5.12□□□□□ -1.59
VSX2P58304 NDUFB4P8-201ENST00000435351 367 ntBASIC5.12□□□□□ -1.59
VSX2P58304 AL359265.1-201ENST00000440296 795 ntBASIC5.12□□□□□ -1.59
VSX2P58304 AL163193.1-201ENST00000444895 788 ntBASIC5.12□□□□□ -1.59
VSX2P58304 AC023271.1-201ENST00000445936 1090 ntBASIC5.12□□□□□ -1.59
VSX2P58304 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.12□□□□□ -1.59
VSX2P58304 RN7SL172P-201ENST00000460535 303 ntBASIC5.12□□□□□ -1.59
VSX2P58304 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.12□□□□□ -1.59
VSX2P58304 HIGD1AP14-201ENST00000507617 282 ntBASIC5.12□□□□□ -1.59
VSX2P58304 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.12□□□□□ -1.59
VSX2P58304 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.12□□□□□ -1.59
VSX2P58304 AC079064.1-201ENST00000528365 362 ntBASIC5.12□□□□□ -1.59
VSX2P58304 OR4A43P-201ENST00000532938 908 ntBASIC5.12□□□□□ -1.59
VSX2P58304 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.12□□□□□ -1.59
VSX2P58304 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
VSX2P58304 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.12□□□□□ -1.59
VSX2P58304 RN7SL356P-201ENST00000582228 248 ntBASIC5.12□□□□□ -1.59
VSX2P58304 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.12□□□□□ -1.59
VSX2P58304 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.12□□□□□ -1.59
VSX2P58304 AC009027.1-201ENST00000604510 479 ntBASIC5.12□□□□□ -1.59
VSX2P58304 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.12□□□□□ -1.59
VSX2P58304 AC138965.3-201ENST00000623875 498 ntBASIC5.12□□□□□ -1.59
VSX2P58304 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.12□□□□□ -1.59
VSX2P58304 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VSX2P58304 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VSX2P58304 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.12□□□□□ -1.59
VSX2P58304 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.12□□□□□ -1.59
VSX2P58304 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VSX2P58304 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
VSX2P58304 AC006206.1-201ENST00000544842 3387 ntBASIC5.11□□□□□ -1.59
VSX2P58304 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
VSX2P58304 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VSX2P58304 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VSX2P58304 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
VSX2P58304 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VSX2P58304 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VSX2P58304 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.11□□□□□ -1.59
VSX2P58304 MIR223-201ENST00000385204 110 ntBASIC5.11□□□□□ -1.59
VSX2P58304 DBIP1-201ENST00000401435 260 ntBASIC5.11□□□□□ -1.59
VSX2P58304 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.11□□□□□ -1.59
VSX2P58304 NANOGP4-201ENST00000427230 913 ntBASIC5.11□□□□□ -1.59
VSX2P58304 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.11□□□□□ -1.59
VSX2P58304 RPL12P18-201ENST00000437175 325 ntBASIC5.11□□□□□ -1.59
VSX2P58304 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.11□□□□□ -1.59
VSX2P58304 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VSX2P58304 RPS21P4-201ENST00000487122 248 ntBASIC5.11□□□□□ -1.59
VSX2P58304 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.11□□□□□ -1.59
VSX2P58304 RNA5SP92-201ENST00000516437 110 ntBASIC5.11□□□□□ -1.59
VSX2P58304 SCARNA20.4-201ENST00000516969 131 ntBASIC5.11□□□□□ -1.59
VSX2P58304 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.11□□□□□ -1.59
VSX2P58304 YWHABP2-201ENST00000540201 713 ntBASIC5.11□□□□□ -1.59
VSX2P58304 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
VSX2P58304 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.11□□□□□ -1.59
VSX2P58304 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.11□□□□□ -1.59
VSX2P58304 AC051619.2-201ENST00000559063 397 ntBASIC5.11□□□□□ -1.59
VSX2P58304 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.11□□□□□ -1.59
VSX2P58304 AC105036.1-201ENST00000566222 271 ntBASIC5.11□□□□□ -1.59
VSX2P58304 AC009962.1-201ENST00000567327 3813 ntBASIC5.11□□□□□ -1.59
VSX2P58304 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.11□□□□□ -1.59
VSX2P58304 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.11□□□□□ -1.59
VSX2P58304 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
VSX2P58304 OR7E18P-201ENST00000592589 702 ntBASIC5.11□□□□□ -1.59
VSX2P58304 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.11□□□□□ -1.59
VSX2P58304 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.11□□□□□ -1.59
VSX2P58304 AP002505.2-201ENST00000623585 696 ntBASIC5.11□□□□□ -1.59
VSX2P58304 OR55B1P-203ENST00000641518 2602 ntBASIC5.11□□□□□ -1.59
VSX2P58304 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.11□□□□□ -1.59
VSX2P58304 TCP11X1-202ENST00000622971 1372 ntBASIC5.11□□□□□ -1.59
VSX2P58304 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VSX2P58304 AC011493.1-201ENST00000596753 1632 ntBASIC5.11□□□□□ -1.59
VSX2P58304 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VSX2P58304 AC003985.2-201ENST00000562268 1669 ntBASIC5.11□□□□□ -1.59
VSX2P58304 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VSX2P58304 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.11□□□□□ -1.59
VSX2P58304 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VSX2P58304 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms