Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH12P55289 HYALP1-201ENST00000417674 1279 ntBASIC5.27□□□□□ -1.57
CDH12P55289 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH12P55289 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH12P55289 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.27□□□□□ -1.57
CDH12P55289 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH12P55289 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH12P55289 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH12P55289 TMEM183AP1-205ENST00000432739 290 ntBASIC5.27□□□□□ -1.57
CDH12P55289 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH12P55289 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH12P55289 LINC02210-201ENST00000444561 288 ntBASIC5.27□□□□□ -1.57
CDH12P55289 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH12P55289 RPL23AP23-201ENST00000452590 471 ntBASIC5.27□□□□□ -1.57
CDH12P55289 PPIAP27-201ENST00000453800 265 ntBASIC5.27□□□□□ -1.57
CDH12P55289 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH12P55289 AC093166.4-201ENST00000457867 318 ntBASIC5.27□□□□□ -1.57
CDH12P55289 SNORD125-201ENST00000459538 96 ntBASIC5.27□□□□□ -1.57
CDH12P55289 RPS23P2-201ENST00000463671 415 ntBASIC5.27□□□□□ -1.57
CDH12P55289 AC104339.1-201ENST00000465478 348 ntBASIC5.27□□□□□ -1.57
CDH12P55289 AC104982.1-201ENST00000478775 574 ntBASIC5.27□□□□□ -1.57
CDH12P55289 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.27□□□□□ -1.57
CDH12P55289 RPS17P5-201ENST00000498293 408 ntBASIC5.27□□□□□ -1.57
CDH12P55289 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH12P55289 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.27□□□□□ -1.57
CDH12P55289 GAPDHP71-201ENST00000511530 1003 ntBASIC5.27□□□□□ -1.57
CDH12P55289 RNA5SP340-201ENST00000517132 107 ntBASIC5.27□□□□□ -1.57
CDH12P55289 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH12P55289 WBP1LP3-201ENST00000523033 208 ntBASIC5.27□□□□□ -1.57
CDH12P55289 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.27□□□□□ -1.57
CDH12P55289 AP003396.4-201ENST00000527574 265 ntBASIC5.27□□□□□ -1.57
CDH12P55289 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CDH12P55289 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.27□□□□□ -1.57
CDH12P55289 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH12P55289 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.27□□□□□ -1.57
CDH12P55289 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH12P55289 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH12P55289 AC006530.1-201ENST00000555980 571 ntBASIC5.27□□□□□ -1.57
CDH12P55289 AL845552.1-201ENST00000556820 323 ntBASIC5.27□□□□□ -1.57
CDH12P55289 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH12P55289 AC025918.2-201ENST00000558683 763 ntBASIC5.27□□□□□ -1.57
CDH12P55289 AGGF1P9-201ENST00000561884 913 ntBASIC5.27□□□□□ -1.57
CDH12P55289 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CDH12P55289 DHFRP1-201ENST00000579682 559 ntBASIC5.27□□□□□ -1.57
CDH12P55289 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.27□□□□□ -1.57
CDH12P55289 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH12P55289 AC067838.1-201ENST00000606064 577 ntBASIC5.27□□□□□ -1.57
CDH12P55289 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH12P55289 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.27□□□□□ -1.57
CDH12P55289 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDH12P55289 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH12P55289 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDH12P55289 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH12P55289 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH12P55289 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
CDH12P55289 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.26□□□□□ -1.57
CDH12P55289 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH12P55289 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CDH12P55289 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH12P55289 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH12P55289 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH12P55289 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH12P55289 CAP1P2-201ENST00000417455 1409 ntBASIC5.26□□□□□ -1.57
CDH12P55289 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH12P55289 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH12P55289 AC010132.2-201ENST00000295493 1043 ntBASIC5.26□□□□□ -1.57
CDH12P55289 COX6B1P3-201ENST00000312310 260 ntBASIC5.26□□□□□ -1.57
CDH12P55289 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CDH12P55289 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CDH12P55289 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH12P55289 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH12P55289 BX664727.1-201ENST00000416024 466 ntBASIC5.26□□□□□ -1.57
CDH12P55289 AC106883.1-201ENST00000418805 562 ntBASIC5.26□□□□□ -1.57
CDH12P55289 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH12P55289 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH12P55289 BX119904.1-201ENST00000432026 348 ntBASIC5.26□□□□□ -1.57
CDH12P55289 CLNS1AP1-201ENST00000435954 682 ntBASIC5.26□□□□□ -1.57
CDH12P55289 GAPDHP48-201ENST00000436626 961 ntBASIC5.26□□□□□ -1.57
CDH12P55289 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH12P55289 EIF5AP4-201ENST00000441206 465 ntBASIC5.26□□□□□ -1.57
CDH12P55289 MTCYBP21-201ENST00000443300 1113 ntBASIC5.26□□□□□ -1.57
CDH12P55289 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH12P55289 AC093166.3-201ENST00000448785 303 ntBASIC5.26□□□□□ -1.57
CDH12P55289 RPS26P41-201ENST00000450370 284 ntBASIC5.26□□□□□ -1.57
CDH12P55289 CST12P-201ENST00000457644 362 ntBASIC5.26□□□□□ -1.57
CDH12P55289 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH12P55289 RN7SL193P-201ENST00000491708 276 ntBASIC5.26□□□□□ -1.57
CDH12P55289 PPM1AP1-201ENST00000502740 1135 ntBASIC5.26□□□□□ -1.57
CDH12P55289 AC092349.1-201ENST00000504903 310 ntBASIC5.26□□□□□ -1.57
CDH12P55289 AC096571.1-202ENST00000506634 735 ntBASIC5.26□□□□□ -1.57
CDH12P55289 AC112518.2-201ENST00000508565 425 ntBASIC5.26□□□□□ -1.57
CDH12P55289 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.26□□□□□ -1.57
CDH12P55289 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDH12P55289 AC084121.1-201ENST00000533882 835 ntBASIC5.26□□□□□ -1.57
CDH12P55289 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.26□□□□□ -1.57
CDH12P55289 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.26□□□□□ -1.57
CDH12P55289 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDH12P55289 AC007956.1-201ENST00000555623 542 ntBASIC5.26□□□□□ -1.57
CDH12P55289 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.26□□□□□ -1.57
CDH12P55289 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms