Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NR1H2P55055 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NR1H2P55055 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NR1H2P55055 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NR1H2P55055 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NR1H2P55055 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NR1H2P55055 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NR1H2P55055 SNORD16-201ENST00000362803 99 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 U3.7-201ENST00000363668 216 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NR1H2P55055 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NR1H2P55055 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NR1H2P55055 ATP5F1P6-201ENST00000402768 767 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
NR1H2P55055 TRGV6-201ENST00000417928 299 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.59□□□□□ -1.51
NR1H2P55055 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.59□□□□□ -1.51
NR1H2P55055 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.59□□□□□ -1.51
NR1H2P55055 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.59□□□□□ -1.51
NR1H2P55055 AL158053.1-201ENST00000441503 453 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 RNFT1P2-201ENST00000443064 757 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 RPS23P9-201ENST00000448848 438 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NR1H2P55055 FRG2FP-204ENST00000453982 852 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 RPL12P39-201ENST00000455456 496 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 AC094085.1-201ENST00000468914 584 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NR1H2P55055 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.59□□□□□ -1.51
NR1H2P55055 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.59□□□□□ -1.51
NR1H2P55055 HMGN1P15-201ENST00000513870 295 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.59□□□□□ -1.51
NR1H2P55055 AC013701.1-201ENST00000522657 465 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.59□□□□□ -1.51
NR1H2P55055 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NR1H2P55055 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.59□□□□□ -1.51
NR1H2P55055 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.59□□□□□ -1.51
NR1H2P55055 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.59□□□□□ -1.51
NR1H2P55055 DNAJC19P3-201ENST00000594491 331 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.51
NR1H2P55055 BNIP3P39-201ENST00000601077 554 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 FAM72A-208ENST00000607379 1139 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 AL365181.4-201ENST00000609800 547 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.59□□□□□ -1.51
NR1H2P55055 AP000943.4-201ENST00000622912 357 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 AC010435.1-201ENST00000623353 1177 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NR1H2P55055 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.59□□□□□ -1.51
NR1H2P55055 AL590396.2-201ENST00000636511 1041 ntBASIC5.59□□□□□ -1.51
NR1H2P55055 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
NR1H2P55055 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NR1H2P55055 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NR1H2P55055 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.59□□□□□ -1.51
NR1H2P55055 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
NR1H2P55055 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
NR1H2P55055 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NR1H2P55055 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NR1H2P55055 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NR1H2P55055 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NR1H2P55055 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NR1H2P55055 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.58□□□□□ -1.52
NR1H2P55055 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
NR1H2P55055 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
NR1H2P55055 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.58□□□□□ -1.52
NR1H2P55055 MIR16-2-201ENST00000362117 81 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 RNU6-252P-201ENST00000363232 107 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
NR1H2P55055 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.58□□□□□ -1.52
NR1H2P55055 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NR1H2P55055 RNU6-452P-201ENST00000384406 107 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 RNU6-244P-201ENST00000391028 104 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
NR1H2P55055 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.58□□□□□ -1.52
NR1H2P55055 RN7SKP279-201ENST00000411383 298 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.58□□□□□ -1.52
NR1H2P55055 PTCD2P2-201ENST00000415579 1095 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 NIFKP3-201ENST00000417799 865 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 AC113412.1-201ENST00000425840 504 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 RPL12P18-201ENST00000437175 325 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 CXCR2P1-202ENST00000443392 1074 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.58□□□□□ -1.52
NR1H2P55055 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.58□□□□□ -1.52
NR1H2P55055 RN7SL643P-201ENST00000471845 291 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 SETP6-201ENST00000479329 568 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.58□□□□□ -1.52
NR1H2P55055 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.58□□□□□ -1.52
NR1H2P55055 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.58□□□□□ -1.52
NR1H2P55055 AC112518.2-201ENST00000508565 425 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 KHDC1P1-201ENST00000511053 508 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.58□□□□□ -1.52
NR1H2P55055 SNORA31.13-201ENST00000516624 135 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 snoU109.6-201ENST00000516831 118 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 IGLVIV-64-201ENST00000518581 301 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.58□□□□□ -1.52
NR1H2P55055 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.58□□□□□ -1.52
NR1H2P55055 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NR1H2P55055 AC106785.3-201ENST00000564064 847 ntBASIC5.58□□□□□ -1.52
NR1H2P55055 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.58□□□□□ -1.52
NR1H2P55055 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.58□□□□□ -1.52
NR1H2P55055 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.58□□□□□ -1.52
NR1H2P55055 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms