Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.35□□□□□ -1.39
NUP98P52948 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.34□□□□□ -1.39
NUP98P52948 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NUP98P52948 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NUP98P52948 RNA5SP345-201ENST00000410646 108 ntBASIC6.34□□□□□ -1.39
NUP98P52948 AC069213.2-201ENST00000420238 366 ntBASIC6.34□□□□□ -1.39
NUP98P52948 MRPS21P2-201ENST00000424704 264 ntBASIC6.34□□□□□ -1.39
NUP98P52948 AC017019.1-201ENST00000426129 261 ntBASIC6.34□□□□□ -1.39
NUP98P52948 AC007559.1-201ENST00000428736 355 ntBASIC6.34□□□□□ -1.39
NUP98P52948 NDUFB4P8-201ENST00000435351 367 ntBASIC6.34□□□□□ -1.39
NUP98P52948 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.34□□□□□ -1.39
NUP98P52948 AC136777.2-201ENST00000522979 358 ntBASIC6.34□□□□□ -1.39
NUP98P52948 AC079064.1-201ENST00000528365 362 ntBASIC6.34□□□□□ -1.39
NUP98P52948 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.34□□□□□ -1.39
NUP98P52948 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
NUP98P52948 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
NUP98P52948 AC034229.2-201ENST00000566945 2508 ntBASIC6.34□□□□□ -1.39
NUP98P52948 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NUP98P52948 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NUP98P52948 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC6.34□□□□□ -1.39
NUP98P52948 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NUP98P52948 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NUP98P52948 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NUP98P52948 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NUP98P52948 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.34□□□□□ -1.39
NUP98P52948 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NUP98P52948 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
NUP98P52948 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
NUP98P52948 AL731532.1-201ENST00000623972 4236 ntBASIC6.34□□□□□ -1.39
NUP98P52948 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
NUP98P52948 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
NUP98P52948 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.34□□□□□ -1.39
NUP98P52948 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.34□□□□□ -1.39
NUP98P52948 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NUP98P52948 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NUP98P52948 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.34□□□□□ -1.39
NUP98P52948 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NUP98P52948 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.34□□□□□ -1.39
NUP98P52948 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
NUP98P52948 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.4
NUP98P52948 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.4
NUP98P52948 RN7SKP114-201ENST00000410327 279 ntBASIC6.34□□□□□ -1.4
NUP98P52948 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.34□□□□□ -1.4
NUP98P52948 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.34□□□□□ -1.4
NUP98P52948 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.34□□□□□ -1.4
NUP98P52948 AC006463.2-201ENST00000473326 348 ntBASIC6.34□□□□□ -1.4
NUP98P52948 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.34□□□□□ -1.4
NUP98P52948 AC098976.1-201ENST00000513014 541 ntBASIC6.34□□□□□ -1.4
NUP98P52948 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.34□□□□□ -1.4
NUP98P52948 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.34□□□□□ -1.4
NUP98P52948 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.34□□□□□ -1.4
NUP98P52948 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.34□□□□□ -1.4
NUP98P52948 AC135068.12-201ENST00000637370 931 ntBASIC6.34□□□□□ -1.4
NUP98P52948 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
NUP98P52948 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
NUP98P52948 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
NUP98P52948 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
NUP98P52948 SAMMSON-226ENST00000642089 1582 ntBASIC6.33□□□□□ -1.4
NUP98P52948 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.33□□□□□ -1.4
NUP98P52948 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.33□□□□□ -1.4
NUP98P52948 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.33□□□□□ -1.4
NUP98P52948 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
NUP98P52948 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NUP98P52948 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NUP98P52948 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
NUP98P52948 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.33□□□□□ -1.4
NUP98P52948 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NUP98P52948 AL590240.1-201ENST00000334118 313 ntBASIC6.33□□□□□ -1.4
NUP98P52948 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.33□□□□□ -1.4
NUP98P52948 AC245028.1-201ENST00000423259 256 ntBASIC6.33□□□□□ -1.4
NUP98P52948 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.33□□□□□ -1.4
NUP98P52948 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.33□□□□□ -1.4
NUP98P52948 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.33□□□□□ -1.4
NUP98P52948 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.33□□□□□ -1.4
NUP98P52948 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.33□□□□□ -1.4
NUP98P52948 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.33□□□□□ -1.4
NUP98P52948 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.33□□□□□ -1.4
NUP98P52948 AC068790.4-201ENST00000602474 263 ntBASIC6.33□□□□□ -1.4
NUP98P52948 AL512782.1-201ENST00000603093 364 ntBASIC6.33□□□□□ -1.4
NUP98P52948 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.33□□□□□ -1.4
NUP98P52948 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.33□□□□□ -1.4
NUP98P52948 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.33□□□□□ -1.4
NUP98P52948 NLRP3P1-201ENST00000622303 1785 ntBASIC6.33□□□□□ -1.4
NUP98P52948 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NUP98P52948 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NUP98P52948 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
NUP98P52948 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NUP98P52948 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NUP98P52948 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NUP98P52948 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NUP98P52948 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NUP98P52948 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NUP98P52948 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.32□□□□□ -1.4
NUP98P52948 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.32□□□□□ -1.4
NUP98P52948 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.32□□□□□ -1.4
NUP98P52948 SLC25A18P1-201ENST00000449385 454 ntBASIC6.32□□□□□ -1.4
NUP98P52948 OR52J1P-201ENST00000450596 932 ntBASIC6.32□□□□□ -1.4
NUP98P52948 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.32□□□□□ -1.4
NUP98P52948 AC020779.1-201ENST00000478757 796 ntBASIC6.32□□□□□ -1.4
NUP98P52948 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms