Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC096708.4-201ENST00000620563 552 ntBASIC6.13□□□□□ -1.43
NEK3P51956 AC132825.7-201ENST00000638744 335 ntBASIC6.13□□□□□ -1.43
NEK3P51956 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
NEK3P51956 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NEK3P51956 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.13□□□□□ -1.43
NEK3P51956 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.13□□□□□ -1.43
NEK3P51956 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NEK3P51956 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.13□□□□□ -1.43
NEK3P51956 AC026523.2-201ENST00000625039 7739 ntBASIC6.13□□□□□ -1.43
NEK3P51956 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NEK3P51956 AC027228.2-201ENST00000567141 2154 ntBASIC6.13□□□□□ -1.43
NEK3P51956 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NEK3P51956 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
NEK3P51956 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
NEK3P51956 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
NEK3P51956 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
NEK3P51956 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NEK3P51956 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
NEK3P51956 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NEK3P51956 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
NEK3P51956 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NEK3P51956 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NEK3P51956 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.12□□□□□ -1.43
NEK3P51956 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NEK3P51956 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NEK3P51956 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NEK3P51956 RNU6-481P-201ENST00000384194 107 ntBASIC6.12□□□□□ -1.43
NEK3P51956 RNU6-925P-201ENST00000384629 104 ntBASIC6.12□□□□□ -1.43
NEK3P51956 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NEK3P51956 RN7SKP17-201ENST00000411242 351 ntBASIC6.12□□□□□ -1.43
NEK3P51956 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NEK3P51956 OR5M12P-201ENST00000423388 929 ntBASIC6.12□□□□□ -1.43
NEK3P51956 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.12□□□□□ -1.43
NEK3P51956 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.12□□□□□ -1.43
NEK3P51956 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.12□□□□□ -1.43
NEK3P51956 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.12□□□□□ -1.43
NEK3P51956 MTCO3P21-201ENST00000430791 643 ntBASIC6.12□□□□□ -1.43
NEK3P51956 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.12□□□□□ -1.43
NEK3P51956 AC044797.1-201ENST00000445744 679 ntBASIC6.12□□□□□ -1.43
NEK3P51956 AL358876.1-201ENST00000453364 1075 ntBASIC6.12□□□□□ -1.43
NEK3P51956 RAB28P2-201ENST00000454299 641 ntBASIC6.12□□□□□ -1.43
NEK3P51956 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.12□□□□□ -1.43
NEK3P51956 NPM1P28-201ENST00000492269 840 ntBASIC6.12□□□□□ -1.43
NEK3P51956 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NEK3P51956 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.12□□□□□ -1.43
NEK3P51956 GTF2H2B-203ENST00000508065 1432 ntBASIC6.12□□□□□ -1.43
NEK3P51956 OR5H7P-201ENST00000514084 930 ntBASIC6.12□□□□□ -1.43
NEK3P51956 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.12□□□□□ -1.43
NEK3P51956 TRIM51DP-201ENST00000529746 596 ntBASIC6.12□□□□□ -1.43
NEK3P51956 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.12□□□□□ -1.43
NEK3P51956 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.12□□□□□ -1.43
NEK3P51956 SULT1C2P2-201ENST00000562517 294 ntBASIC6.12□□□□□ -1.43
NEK3P51956 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.12□□□□□ -1.43
NEK3P51956 AP005119.1-201ENST00000580956 292 ntBASIC6.12□□□□□ -1.43
NEK3P51956 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.12□□□□□ -1.43
NEK3P51956 AP003117.1-201ENST00000602771 554 ntBASIC6.12□□□□□ -1.43
NEK3P51956 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.12□□□□□ -1.43
NEK3P51956 AC105148.1-201ENST00000604961 409 ntBASIC6.12□□□□□ -1.43
NEK3P51956 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.12□□□□□ -1.43
NEK3P51956 AC108673.3-201ENST00000609183 335 ntBASIC6.12□□□□□ -1.43
NEK3P51956 AP000240.1-201ENST00000609910 452 ntBASIC6.12□□□□□ -1.43
NEK3P51956 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.12□□□□□ -1.43
NEK3P51956 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.12□□□□□ -1.43
NEK3P51956 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.12□□□□□ -1.43
NEK3P51956 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.12□□□□□ -1.43
NEK3P51956 AC011815.3-201ENST00000624194 473 ntBASIC6.12□□□□□ -1.43
NEK3P51956 AP003497.2-201ENST00000624220 967 ntBASIC6.12□□□□□ -1.43
NEK3P51956 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.12□□□□□ -1.43
NEK3P51956 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.12□□□□□ -1.43
NEK3P51956 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.12□□□□□ -1.43
NEK3P51956 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEK3P51956 AC138907.8-201ENST00000623981 2256 ntBASIC6.11□□□□□ -1.43
NEK3P51956 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEK3P51956 AC005224.3-201ENST00000584683 2140 ntBASIC6.11□□□□□ -1.43
NEK3P51956 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NEK3P51956 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
NEK3P51956 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.11□□□□□ -1.43
NEK3P51956 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.11□□□□□ -1.43
NEK3P51956 PSG10P-201ENST00000501199 1500 ntBASIC6.11□□□□□ -1.43
NEK3P51956 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.11□□□□□ -1.43
NEK3P51956 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEK3P51956 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.11□□□□□ -1.43
NEK3P51956 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.11□□□□□ -1.43
NEK3P51956 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.11□□□□□ -1.43
NEK3P51956 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.11□□□□□ -1.43
NEK3P51956 RNA5SP477-201ENST00000362639 119 ntBASIC6.11□□□□□ -1.43
NEK3P51956 RNA5SP375-201ENST00000362975 119 ntBASIC6.11□□□□□ -1.43
NEK3P51956 RNU6-249P-201ENST00000363016 102 ntBASIC6.11□□□□□ -1.43
NEK3P51956 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.11□□□□□ -1.43
NEK3P51956 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEK3P51956 RNU6-1005P-201ENST00000384519 107 ntBASIC6.11□□□□□ -1.43
NEK3P51956 RNU6-1000P-201ENST00000391066 106 ntBASIC6.11□□□□□ -1.43
NEK3P51956 Z68694.1-201ENST00000413929 841 ntBASIC6.11□□□□□ -1.43
NEK3P51956 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.11□□□□□ -1.43
NEK3P51956 AC023128.2-201ENST00000420880 1223 ntBASIC6.11□□□□□ -1.43
NEK3P51956 RPS15AP30-201ENST00000420976 390 ntBASIC6.11□□□□□ -1.43
NEK3P51956 AC073310.1-201ENST00000423226 1033 ntBASIC6.11□□□□□ -1.43
NEK3P51956 AC115285.1-201ENST00000424879 736 ntBASIC6.11□□□□□ -1.43
NEK3P51956 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.11□□□□□ -1.43
NEK3P51956 AL389925.1-201ENST00000432257 728 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms