Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.26□□□□□ -1.25
USP11P51784 AC090286.3-201ENST00000573133 187 ntBASIC7.26□□□□□ -1.25
USP11P51784 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.26□□□□□ -1.25
USP11P51784 MIR4301-201ENST00000577203 66 ntBASIC7.26□□□□□ -1.25
USP11P51784 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC7.26□□□□□ -1.25
USP11P51784 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.26□□□□□ -1.25
USP11P51784 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.26□□□□□ -1.25
USP11P51784 CLPTM1LP1-201ENST00000604519 484 ntBASIC7.26□□□□□ -1.25
USP11P51784 AC005377.1-201ENST00000605126 456 ntBASIC7.26□□□□□ -1.25
USP11P51784 AL109618.2-201ENST00000605527 211 ntBASIC7.26□□□□□ -1.25
USP11P51784 AC010857.1-201ENST00000606398 594 ntBASIC7.26□□□□□ -1.25
USP11P51784 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC7.26□□□□□ -1.25
USP11P51784 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.26□□□□□ -1.25
USP11P51784 AC025253.1-201ENST00000613623 543 ntBASIC7.26□□□□□ -1.25
USP11P51784 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7.26□□□□□ -1.25
USP11P51784 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.26□□□□□ -1.25
USP11P51784 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC7.26□□□□□ -1.25
USP11P51784 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.26□□□□□ -1.25
USP11P51784 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.26□□□□□ -1.25
USP11P51784 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
USP11P51784 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USP11P51784 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
USP11P51784 ZNF90P1-201ENST00000480493 1951 ntBASIC7.26□□□□□ -1.25
USP11P51784 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
USP11P51784 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USP11P51784 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
USP11P51784 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USP11P51784 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
USP11P51784 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USP11P51784 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.25□□□□□ -1.25
USP11P51784 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USP11P51784 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.25□□□□□ -1.25
USP11P51784 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
USP11P51784 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USP11P51784 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USP11P51784 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
USP11P51784 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.25□□□□□ -1.25
USP11P51784 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USP11P51784 RNU6-797P-201ENST00000363101 109 ntBASIC7.25□□□□□ -1.25
USP11P51784 RNU6-157P-201ENST00000383957 107 ntBASIC7.25□□□□□ -1.25
USP11P51784 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.25□□□□□ -1.25
USP11P51784 ZNF863P-201ENST00000426746 417 ntBASIC7.25□□□□□ -1.25
USP11P51784 MOB1AP1-201ENST00000430903 535 ntBASIC7.25□□□□□ -1.25
USP11P51784 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC7.25□□□□□ -1.25
USP11P51784 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.25□□□□□ -1.25
USP11P51784 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC7.25□□□□□ -1.25
USP11P51784 AC009263.1-201ENST00000441193 1239 ntBASIC7.25□□□□□ -1.25
USP11P51784 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC7.25□□□□□ -1.25
USP11P51784 POU5F1P5-201ENST00000445059 658 ntBASIC7.25□□□□□ -1.25
USP11P51784 AC097359.1-201ENST00000447946 463 ntBASIC7.25□□□□□ -1.25
USP11P51784 AL096803.2-201ENST00000450032 677 ntBASIC7.25□□□□□ -1.25
USP11P51784 ELOCP23-201ENST00000452014 332 ntBASIC7.25□□□□□ -1.25
USP11P51784 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
USP11P51784 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.25□□□□□ -1.25
USP11P51784 SNX18P26-201ENST00000458433 740 ntBASIC7.25□□□□□ -1.25
USP11P51784 AC092045.1-201ENST00000495716 1231 ntBASIC7.25□□□□□ -1.25
USP11P51784 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.25□□□□□ -1.25
USP11P51784 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.25□□□□□ -1.25
USP11P51784 GTF2F2P1-201ENST00000511083 675 ntBASIC7.25□□□□□ -1.25
USP11P51784 AC091965.2-201ENST00000512324 613 ntBASIC7.25□□□□□ -1.25
USP11P51784 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC7.25□□□□□ -1.25
USP11P51784 COX6B1P4-201ENST00000519826 484 ntBASIC7.25□□□□□ -1.25
USP11P51784 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC7.25□□□□□ -1.25
USP11P51784 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.25□□□□□ -1.25
USP11P51784 KCTD9P4-201ENST00000526766 1166 ntBASIC7.25□□□□□ -1.25
USP11P51784 AC016957.1-201ENST00000534895 309 ntBASIC7.25□□□□□ -1.25
USP11P51784 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.25□□□□□ -1.25
USP11P51784 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.25□□□□□ -1.25
USP11P51784 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC7.25□□□□□ -1.25
USP11P51784 AC121758.1-202ENST00000556917 658 ntBASIC7.25□□□□□ -1.25
USP11P51784 AC087465.1-201ENST00000560574 245 ntBASIC7.25□□□□□ -1.25
USP11P51784 AC018558.5-201ENST00000565840 952 ntBASIC7.25□□□□□ -1.25
USP11P51784 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.25□□□□□ -1.25
USP11P51784 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.25□□□□□ -1.25
USP11P51784 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC7.25□□□□□ -1.25
USP11P51784 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC7.25□□□□□ -1.25
USP11P51784 AC005332.4-201ENST00000592752 579 ntBASIC7.25□□□□□ -1.25
USP11P51784 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC7.25□□□□□ -1.25
USP11P51784 MIR6811-201ENST00000620409 58 ntBASIC7.25□□□□□ -1.25
USP11P51784 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
USP11P51784 AC019080.5-201ENST00000624891 757 ntBASIC7.25□□□□□ -1.25
USP11P51784 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC7.25□□□□□ -1.25
USP11P51784 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
USP11P51784 CASC19-246ENST00000641625 1606 ntBASIC7.25□□□□□ -1.25
USP11P51784 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
USP11P51784 AL136984.1-201ENST00000607611 1893 ntBASIC7.25□□□□□ -1.25
USP11P51784 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
USP11P51784 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
USP11P51784 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.25□□□□□ -1.25
USP11P51784 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.25□□□□□ -1.25
USP11P51784 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USP11P51784 AC005618.1-201ENST00000606901 3148 ntBASIC7.25□□□□□ -1.25
USP11P51784 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
USP11P51784 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC7.25□□□□□ -1.25
USP11P51784 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC7.25□□□□□ -1.25
USP11P51784 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
USP11P51784 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms