Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
GPC3P51654 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
GPC3P51654 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.96□□□□□ -1.45
GPC3P51654 AL359715.3-201ENST00000569267 2123 ntBASIC5.96□□□□□ -1.45
GPC3P51654 AC011493.1-201ENST00000596753 1632 ntBASIC5.96□□□□□ -1.45
GPC3P51654 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.96□□□□□ -1.46
GPC3P51654 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
GPC3P51654 AC092681.1-201ENST00000297369 291 ntBASIC5.96□□□□□ -1.46
GPC3P51654 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
GPC3P51654 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
GPC3P51654 RNA5SP487-201ENST00000410186 122 ntBASIC5.96□□□□□ -1.46
GPC3P51654 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GPC3P51654 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.96□□□□□ -1.46
GPC3P51654 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.96□□□□□ -1.46
GPC3P51654 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.96□□□□□ -1.46
GPC3P51654 SNRPFP2-201ENST00000440710 251 ntBASIC5.96□□□□□ -1.46
GPC3P51654 GAPDHP25-201ENST00000447061 1001 ntBASIC5.96□□□□□ -1.46
GPC3P51654 PSAT1P4-201ENST00000466500 526 ntBASIC5.96□□□□□ -1.46
GPC3P51654 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.96□□□□□ -1.46
GPC3P51654 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.96□□□□□ -1.46
GPC3P51654 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.96□□□□□ -1.46
GPC3P51654 AC015864.1-201ENST00000496512 544 ntBASIC5.96□□□□□ -1.46
GPC3P51654 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.96□□□□□ -1.46
GPC3P51654 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GPC3P51654 AC091912.1-201ENST00000511351 248 ntBASIC5.96□□□□□ -1.46
GPC3P51654 SEPT10P1-201ENST00000517342 1162 ntBASIC5.96□□□□□ -1.46
GPC3P51654 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.96□□□□□ -1.46
GPC3P51654 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
GPC3P51654 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
GPC3P51654 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.96□□□□□ -1.46
GPC3P51654 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.96□□□□□ -1.46
GPC3P51654 AC069307.1-201ENST00000602820 447 ntBASIC5.96□□□□□ -1.46
GPC3P51654 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.96□□□□□ -1.46
GPC3P51654 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.96□□□□□ -1.46
GPC3P51654 AL139407.1-201ENST00000613826 1175 ntBASIC5.96□□□□□ -1.46
GPC3P51654 MIR7155-201ENST00000615925 56 ntBASIC5.96□□□□□ -1.46
GPC3P51654 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.96□□□□□ -1.46
GPC3P51654 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
GPC3P51654 OR55B1P-203ENST00000641518 2602 ntBASIC5.96□□□□□ -1.46
GPC3P51654 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
GPC3P51654 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.96□□□□□ -1.46
GPC3P51654 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GPC3P51654 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GPC3P51654 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
GPC3P51654 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GPC3P51654 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.96□□□□□ -1.46
GPC3P51654 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
GPC3P51654 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
GPC3P51654 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
GPC3P51654 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
GPC3P51654 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
GPC3P51654 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GPC3P51654 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
GPC3P51654 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GPC3P51654 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GPC3P51654 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
GPC3P51654 AC079097.1-201ENST00000512187 1399 ntBASIC5.95□□□□□ -1.46
GPC3P51654 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.95□□□□□ -1.46
GPC3P51654 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
GPC3P51654 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.95□□□□□ -1.46
GPC3P51654 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
GPC3P51654 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GPC3P51654 U8.4-201ENST00000363626 134 ntBASIC5.95□□□□□ -1.46
GPC3P51654 SNORA74A-201ENST00000364089 198 ntBASIC5.95□□□□□ -1.46
GPC3P51654 U3.28-201ENST00000391249 210 ntBASIC5.95□□□□□ -1.46
GPC3P51654 PTP4A1P1-201ENST00000420539 515 ntBASIC5.95□□□□□ -1.46
GPC3P51654 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.95□□□□□ -1.46
GPC3P51654 RPL12P18-201ENST00000437175 325 ntBASIC5.95□□□□□ -1.46
GPC3P51654 GAPDHP58-201ENST00000438477 1006 ntBASIC5.95□□□□□ -1.46
GPC3P51654 AC073465.2-201ENST00000440938 498 ntBASIC5.95□□□□□ -1.46
GPC3P51654 AC239798.3-201ENST00000454459 408 ntBASIC5.95□□□□□ -1.46
GPC3P51654 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
GPC3P51654 RPL15P21-201ENST00000495592 567 ntBASIC5.95□□□□□ -1.46
GPC3P51654 USP9YP2-201ENST00000504503 1000 ntBASIC5.95□□□□□ -1.46
GPC3P51654 AC109464.1-201ENST00000511091 819 ntBASIC5.95□□□□□ -1.46
GPC3P51654 USP9YP1-201ENST00000513521 1002 ntBASIC5.95□□□□□ -1.46
GPC3P51654 AC079064.1-201ENST00000528365 362 ntBASIC5.95□□□□□ -1.46
GPC3P51654 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.95□□□□□ -1.46
GPC3P51654 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GPC3P51654 OR11J2P-201ENST00000555298 907 ntBASIC5.95□□□□□ -1.46
GPC3P51654 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.46
GPC3P51654 NMNAT1P5-201ENST00000559657 841 ntBASIC5.95□□□□□ -1.46
GPC3P51654 AC005341.1-201ENST00000571086 708 ntBASIC5.95□□□□□ -1.46
GPC3P51654 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.95□□□□□ -1.46
GPC3P51654 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.95□□□□□ -1.46
GPC3P51654 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.95□□□□□ -1.46
GPC3P51654 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.95□□□□□ -1.46
GPC3P51654 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.95□□□□□ -1.46
GPC3P51654 AC007786.3-201ENST00000615154 596 ntBASIC5.95□□□□□ -1.46
GPC3P51654 AC037198.3-201ENST00000616754 526 ntBASIC5.95□□□□□ -1.46
GPC3P51654 CYP4F35P-202ENST00000636121 390 ntBASIC5.95□□□□□ -1.46
GPC3P51654 AC074101.1-201ENST00000637861 241 ntBASIC5.95□□□□□ -1.46
GPC3P51654 CASC19-260ENST00000641828 2001 ntBASIC5.95□□□□□ -1.46
GPC3P51654 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GPC3P51654 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
GPC3P51654 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.95□□□□□ -1.46
GPC3P51654 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.95□□□□□ -1.46
GPC3P51654 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GPC3P51654 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.95□□□□□ -1.46
GPC3P51654 AC233968.1-201ENST00000611212 1300 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms