Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC073072.2-201ENST00000447425 348 ntBASIC4.99□□□□□ -1.61
RFC3P40938 RN7SL727P-201ENST00000482164 296 ntBASIC4.99□□□□□ -1.61
RFC3P40938 AC093270.2-201ENST00000486157 792 ntBASIC4.99□□□□□ -1.61
RFC3P40938 RN7SL808P-201ENST00000496066 299 ntBASIC4.99□□□□□ -1.61
RFC3P40938 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.99□□□□□ -1.61
RFC3P40938 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.99□□□□□ -1.61
RFC3P40938 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.99□□□□□ -1.61
RFC3P40938 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.99□□□□□ -1.61
RFC3P40938 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.99□□□□□ -1.61
RFC3P40938 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.99□□□□□ -1.61
RFC3P40938 OR11J2P-201ENST00000555298 907 ntBASIC4.99□□□□□ -1.61
RFC3P40938 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.99□□□□□ -1.61
RFC3P40938 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.99□□□□□ -1.61
RFC3P40938 AC060780.2-201ENST00000589047 198 ntBASIC4.99□□□□□ -1.61
RFC3P40938 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.99□□□□□ -1.61
RFC3P40938 AC005618.4-201ENST00000625053 554 ntBASIC4.99□□□□□ -1.61
RFC3P40938 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.99□□□□□ -1.61
RFC3P40938 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.99□□□□□ -1.61
RFC3P40938 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.99□□□□□ -1.61
RFC3P40938 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.99□□□□□ -1.61
RFC3P40938 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RFC3P40938 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFC3P40938 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFC3P40938 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RFC3P40938 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFC3P40938 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.99□□□□□ -1.61
RFC3P40938 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFC3P40938 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.98□□□□□ -1.61
RFC3P40938 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.98□□□□□ -1.61
RFC3P40938 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RFC3P40938 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.98□□□□□ -1.61
RFC3P40938 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.98□□□□□ -1.61
RFC3P40938 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RFC3P40938 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RFC3P40938 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFC3P40938 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.98□□□□□ -1.61
RFC3P40938 AL078621.3-201ENST00000623707 2042 ntBASIC4.98□□□□□ -1.61
RFC3P40938 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RFC3P40938 RPL23P2-201ENST00000320371 421 ntBASIC4.98□□□□□ -1.61
RFC3P40938 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.98□□□□□ -1.61
RFC3P40938 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFC3P40938 OR4K12P-201ENST00000406538 961 ntBASIC4.98□□□□□ -1.61
RFC3P40938 AL445213.1-201ENST00000412589 747 ntBASIC4.98□□□□□ -1.61
RFC3P40938 SLC35E1P1-201ENST00000419313 864 ntBASIC4.98□□□□□ -1.61
RFC3P40938 AC013268.2-201ENST00000420753 337 ntBASIC4.98□□□□□ -1.61
RFC3P40938 GSTM5P1-201ENST00000434751 660 ntBASIC4.98□□□□□ -1.61
RFC3P40938 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.98□□□□□ -1.61
RFC3P40938 EEF1B2P5-201ENST00000444820 548 ntBASIC4.98□□□□□ -1.61
RFC3P40938 AL596266.1-201ENST00000448132 400 ntBASIC4.98□□□□□ -1.61
RFC3P40938 RN7SL197P-201ENST00000466981 299 ntBASIC4.98□□□□□ -1.61
RFC3P40938 AC079841.1-201ENST00000481228 950 ntBASIC4.98□□□□□ -1.61
RFC3P40938 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.98□□□□□ -1.61
RFC3P40938 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.98□□□□□ -1.61
RFC3P40938 RN7SKP253-201ENST00000516424 309 ntBASIC4.98□□□□□ -1.61
RFC3P40938 SCARNA16.4-201ENST00000516956 187 ntBASIC4.98□□□□□ -1.61
RFC3P40938 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
RFC3P40938 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.98□□□□□ -1.61
RFC3P40938 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.98□□□□□ -1.61
RFC3P40938 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.98□□□□□ -1.61
RFC3P40938 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.98□□□□□ -1.61
RFC3P40938 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.98□□□□□ -1.61
RFC3P40938 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.98□□□□□ -1.61
RFC3P40938 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.98□□□□□ -1.61
RFC3P40938 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.98□□□□□ -1.61
RFC3P40938 AC119501.1-201ENST00000603646 475 ntBASIC4.98□□□□□ -1.61
RFC3P40938 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.98□□□□□ -1.61
RFC3P40938 SAMMSON-227ENST00000642114 1199 ntBASIC4.98□□□□□ -1.61
RFC3P40938 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RFC3P40938 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFC3P40938 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFC3P40938 MTCO1P46-201ENST00000451639 1491 ntBASIC4.98□□□□□ -1.61
RFC3P40938 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFC3P40938 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.98□□□□□ -1.61
RFC3P40938 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.98□□□□□ -1.61
RFC3P40938 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFC3P40938 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
RFC3P40938 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
RFC3P40938 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.98□□□□□ -1.61
RFC3P40938 DDX18P6-201ENST00000450119 1997 ntBASIC4.98□□□□□ -1.61
RFC3P40938 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.98□□□□□ -1.61
RFC3P40938 PCAT14-202ENST00000627127 3935 ntBASIC4.98□□□□□ -1.61
RFC3P40938 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RFC3P40938 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RFC3P40938 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.98□□□□□ -1.61
RFC3P40938 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RFC3P40938 AC011493.1-201ENST00000596753 1632 ntBASIC4.97□□□□□ -1.61
RFC3P40938 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFC3P40938 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RFC3P40938 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RFC3P40938 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RFC3P40938 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RFC3P40938 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFC3P40938 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.97□□□□□ -1.61
RFC3P40938 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFC3P40938 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
RFC3P40938 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFC3P40938 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.97□□□□□ -1.61
RFC3P40938 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFC3P40938 SNORA58B-201ENST00000364259 136 ntBASIC4.97□□□□□ -1.61
RFC3P40938 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms