Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC002519.2-203ENST00000567043 837 ntBASIC7.54□□□□□ -1.2
ERCC3P19447 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC7.54□□□□□ -1.2
ERCC3P19447 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.54□□□□□ -1.2
ERCC3P19447 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.54□□□□□ -1.2
ERCC3P19447 AP000577.1-201ENST00000624366 878 ntBASIC7.54□□□□□ -1.2
ERCC3P19447 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.54□□□□□ -1.2
ERCC3P19447 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.54□□□□□ -1.2
ERCC3P19447 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC7.54□□□□□ -1.2
ERCC3P19447 AC007671.2-201ENST00000637344 619 ntBASIC7.54□□□□□ -1.2
ERCC3P19447 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
ERCC3P19447 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.54□□□□□ -1.2
ERCC3P19447 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
ERCC3P19447 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
ERCC3P19447 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.54□□□□□ -1.2
ERCC3P19447 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
ERCC3P19447 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
ERCC3P19447 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
ERCC3P19447 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
ERCC3P19447 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
ERCC3P19447 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
ERCC3P19447 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.54□□□□□ -1.2
ERCC3P19447 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
ERCC3P19447 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
ERCC3P19447 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.53□□□□□ -1.2
ERCC3P19447 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
ERCC3P19447 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
ERCC3P19447 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
ERCC3P19447 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
ERCC3P19447 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.53□□□□□ -1.2
ERCC3P19447 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
ERCC3P19447 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
ERCC3P19447 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
ERCC3P19447 AC092642.1-201ENST00000392417 425 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.53□□□□□ -1.2
ERCC3P19447 RPL5P20-201ENST00000403848 896 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
ERCC3P19447 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.53□□□□□ -1.2
ERCC3P19447 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC7.53□□□□□ -1.2
ERCC3P19447 RNU2-22P-201ENST00000411266 212 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC7.53□□□□□ -1.2
ERCC3P19447 RPL21P50-201ENST00000417698 477 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.53□□□□□ -1.2
ERCC3P19447 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC7.53□□□□□ -1.2
ERCC3P19447 OSTCP4-201ENST00000424397 449 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 DUTP4-201ENST00000424782 475 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 RPSAP65-201ENST00000429660 595 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
ERCC3P19447 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.53□□□□□ -1.2
ERCC3P19447 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.53□□□□□ -1.2
ERCC3P19447 HMGB1P7-201ENST00000450921 612 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
ERCC3P19447 RN7SL254P-201ENST00000460609 284 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC7.53□□□□□ -1.2
ERCC3P19447 AC011352.2-201ENST00000514574 1016 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC7.53□□□□□ -1.2
ERCC3P19447 MTCO1P49-201ENST00000523429 802 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 TRIM51DP-201ENST00000529746 596 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.53□□□□□ -1.2
ERCC3P19447 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
ERCC3P19447 HIGD1AP17-201ENST00000554576 276 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 AL591767.3-201ENST00000554632 525 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.53□□□□□ -1.2
ERCC3P19447 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.53□□□□□ -1.2
ERCC3P19447 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
ERCC3P19447 RN7SL404P-201ENST00000582421 281 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.53□□□□□ -1.2
ERCC3P19447 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.53□□□□□ -1.2
ERCC3P19447 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC7.53□□□□□ -1.2
ERCC3P19447 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.53□□□□□ -1.2
ERCC3P19447 AP005137.2-201ENST00000609238 400 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 AC091768.1-201ENST00000609258 930 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 AC121761.2-201ENST00000617300 689 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 AC005840.5-201ENST00000619166 599 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 AC026124.2-201ENST00000621847 656 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 AC091931.1-201ENST00000623488 728 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.53□□□□□ -1.2
ERCC3P19447 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
ERCC3P19447 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.53□□□□□ -1.2
ERCC3P19447 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.53□□□□□ -1.2
ERCC3P19447 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
ERCC3P19447 AP005901.5-201ENST00000545779 1796 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.53□□□□□ -1.2
ERCC3P19447 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.53□□□□□ -1.2
ERCC3P19447 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
ERCC3P19447 CASC19-284ENST00000642142 1868 ntBASIC7.53□□□□□ -1.2
ERCC3P19447 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
ERCC3P19447 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
ERCC3P19447 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
ERCC3P19447 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
ERCC3P19447 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
ERCC3P19447 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.52□□□□□ -1.2
ERCC3P19447 CASC19-246ENST00000641625 1606 ntBASIC7.52□□□□□ -1.2
ERCC3P19447 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
ERCC3P19447 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.52□□□□□ -1.21
ERCC3P19447 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
ERCC3P19447 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
ERCC3P19447 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.52□□□□□ -1.21
ERCC3P19447 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC7.52□□□□□ -1.21
ERCC3P19447 AL033543.1-201ENST00000623440 13454 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 AC104966.1-201ENST00000467010 1464 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms