Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC8.86□□□□□ -0.99
TOP2AP11388 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC8.86□□□□□ -0.99
TOP2AP11388 AL034374.2-201ENST00000605281 548 ntBASIC8.86□□□□□ -0.99
TOP2AP11388 MAPK6PS2-201ENST00000379571 2060 ntBASIC8.86□□□□□ -0.99
TOP2AP11388 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
TOP2AP11388 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TOP2AP11388 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
TOP2AP11388 AL590240.1-201ENST00000334118 313 ntBASIC8.85□□□□□ -0.99
TOP2AP11388 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
TOP2AP11388 CYP2AC1P-201ENST00000407830 1173 ntBASIC8.85□□□□□ -0.99
TOP2AP11388 AC004690.1-201ENST00000418216 328 ntBASIC8.85□□□□□ -0.99
TOP2AP11388 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC8.85□□□□□ -0.99
TOP2AP11388 CNOT7P1-201ENST00000429006 852 ntBASIC8.85□□□□□ -0.99
TOP2AP11388 AL606490.8-201ENST00000441624 319 ntBASIC8.85□□□□□ -0.99
TOP2AP11388 AC234781.3-201ENST00000452540 973 ntBASIC8.85□□□□□ -0.99
TOP2AP11388 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
TOP2AP11388 RN7SL319P-201ENST00000480656 221 ntBASIC8.85□□□□□ -0.99
TOP2AP11388 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC8.85□□□□□ -0.99
TOP2AP11388 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC8.85□□□□□ -0.99
TOP2AP11388 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC8.85□□□□□ -0.99
TOP2AP11388 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC8.85□□□□□ -0.99
TOP2AP11388 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC8.85□□□□□ -0.99
TOP2AP11388 UBA2-208ENST00000592791 910 ntTSL 2 BASIC8.85□□□□□ -0.99
TOP2AP11388 SSX9-202ENST00000608568 580 ntTSL 4 BASIC8.85□□□□□ -0.99
TOP2AP11388 AC012414.7-202ENST00000622705 1090 ntBASIC8.85□□□□□ -0.99
TOP2AP11388 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC8.85□□□□□ -0.99
TOP2AP11388 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
TOP2AP11388 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
TOP2AP11388 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
TOP2AP11388 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
TOP2AP11388 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
TOP2AP11388 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC8.85□□□□□ -0.99
TOP2AP11388 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
TOP2AP11388 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.85□□□□□ -0.99
TOP2AP11388 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC8.85□□□□□ -0.99
TOP2AP11388 SNORA70.2-201ENST00000364506 135 ntBASIC8.85□□□□□ -0.99
TOP2AP11388 SNORA62-201ENST00000365493 153 ntBASIC8.85□□□□□ -0.99
TOP2AP11388 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
TOP2AP11388 RPL12P43-201ENST00000420608 499 ntBASIC8.85□□□□□ -0.99
TOP2AP11388 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC8.85□□□□□ -0.99
TOP2AP11388 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC8.85□□□□□ -0.99
TOP2AP11388 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC8.85□□□□□ -0.99
TOP2AP11388 HPRT1P1-201ENST00000509498 657 ntBASIC8.85□□□□□ -0.99
TOP2AP11388 SOX5P1-201ENST00000524155 1127 ntBASIC8.85□□□□□ -0.99
TOP2AP11388 TEX41-238ENST00000604253 709 ntTSL 5 BASIC8.85□□□□□ -0.99
TOP2AP11388 AP001521.2-201ENST00000608772 546 ntBASIC8.85□□□□□ -0.99
TOP2AP11388 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TOP2AP11388 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC8.84□□□□□ -0.99
TOP2AP11388 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC8.84□□□□□ -0.99
TOP2AP11388 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
TOP2AP11388 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC8.84□□□□□ -0.99
TOP2AP11388 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
TOP2AP11388 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
TOP2AP11388 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
TOP2AP11388 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
TOP2AP11388 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
TOP2AP11388 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC8.84□□□□□ -0.99
TOP2AP11388 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC8.84□□□□□ -0.99
TOP2AP11388 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
TOP2AP11388 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC8.84□□□□□ -0.99
TOP2AP11388 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TOP2AP11388 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TOP2AP11388 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC8.84□□□□□ -0.99
TOP2AP11388 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC8.84□□□□□ -0.99
TOP2AP11388 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TOP2AP11388 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
TOP2AP11388 IL6-206ENST00000407492 926 ntTSL 3 BASIC8.84□□□□□ -0.99
TOP2AP11388 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC8.84□□□□□ -0.99
TOP2AP11388 AC005154.2-201ENST00000438110 379 ntBASIC8.84□□□□□ -0.99
TOP2AP11388 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC8.84□□□□□ -0.99
TOP2AP11388 RPL23AP56-201ENST00000460778 453 ntBASIC8.84□□□□□ -0.99
TOP2AP11388 RPS23P7-201ENST00000466210 444 ntBASIC8.84□□□□□ -0.99
TOP2AP11388 OR52A4P-201ENST00000472867 958 ntBASIC8.84□□□□□ -0.99
TOP2AP11388 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
TOP2AP11388 AC093720.1-201ENST00000505681 714 ntBASIC8.84□□□□□ -0.99
TOP2AP11388 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC8.84□□□□□ -0.99
TOP2AP11388 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC8.84□□□□□ -0.99
TOP2AP11388 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC8.84□□□□□ -0.99
TOP2AP11388 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC8.84□□□□□ -0.99
TOP2AP11388 MIR7853-201ENST00000584820 132 ntBASIC8.84□□□□□ -0.99
TOP2AP11388 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC8.84□□□□□ -0.99
TOP2AP11388 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC8.84□□□□□ -0.99
TOP2AP11388 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TOP2AP11388 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
TOP2AP11388 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
TOP2AP11388 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC8.84□□□□□ -1
TOP2AP11388 AL356317.1-201ENST00000396110 1436 ntBASIC8.83□□□□□ -1
TOP2AP11388 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC8.83□□□□□ -1
TOP2AP11388 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC8.83□□□□□ -1
TOP2AP11388 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TOP2AP11388 AC099654.2-201ENST00000433031 1980 ntBASIC8.83□□□□□ -1
TOP2AP11388 AL049697.2-201ENST00000403708 294 ntBASIC8.83□□□□□ -1
TOP2AP11388 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC8.83□□□□□ -1
TOP2AP11388 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC8.83□□□□□ -1
TOP2AP11388 CHIAP3-201ENST00000423668 1133 ntBASIC8.83□□□□□ -1
TOP2AP11388 NUTF2P7-201ENST00000453086 375 ntBASIC8.83□□□□□ -1
TOP2AP11388 RN7SKP67-201ENST00000515905 235 ntBASIC8.83□□□□□ -1
TOP2AP11388 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TOP2AP11388 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC8.83□□□□□ -1
TOP2AP11388 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms