Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SOX1O00570 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX1O00570 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.11□□□□□ -1.27
SOX1O00570 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
SOX1O00570 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.1□□□□□ -1.27
SOX1O00570 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.1□□□□□ -1.27
SOX1O00570 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC7.1□□□□□ -1.27
SOX1O00570 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.1□□□□□ -1.27
SOX1O00570 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
SOX1O00570 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SOX1O00570 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SOX1O00570 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC7.1□□□□□ -1.27
SOX1O00570 CYCSP46-201ENST00000423569 204 ntBASIC7.1□□□□□ -1.27
SOX1O00570 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC7.1□□□□□ -1.27
SOX1O00570 AC023141.3-201ENST00000436698 278 ntBASIC7.1□□□□□ -1.27
SOX1O00570 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.1□□□□□ -1.27
SOX1O00570 AC092170.1-201ENST00000440211 356 ntBASIC7.1□□□□□ -1.27
SOX1O00570 ARAFP2-201ENST00000440565 559 ntBASIC7.1□□□□□ -1.27
SOX1O00570 RPL23AP76-201ENST00000441860 458 ntBASIC7.1□□□□□ -1.27
SOX1O00570 CDC42P1-201ENST00000456658 548 ntBASIC7.1□□□□□ -1.27
SOX1O00570 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7.1□□□□□ -1.27
SOX1O00570 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.1□□□□□ -1.27
SOX1O00570 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.1□□□□□ -1.27
SOX1O00570 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.1□□□□□ -1.27
SOX1O00570 AC025459.1-201ENST00000504072 156 ntBASIC7.1□□□□□ -1.27
SOX1O00570 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC7.1□□□□□ -1.27
SOX1O00570 ARL2BPP4-201ENST00000506854 471 ntBASIC7.1□□□□□ -1.27
SOX1O00570 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC7.1□□□□□ -1.27
SOX1O00570 HSPE1P23-201ENST00000509838 286 ntBASIC7.1□□□□□ -1.27
SOX1O00570 AC010587.2-201ENST00000511727 448 ntBASIC7.1□□□□□ -1.27
SOX1O00570 AC074344.1-201ENST00000512823 224 ntBASIC7.1□□□□□ -1.27
SOX1O00570 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC7.1□□□□□ -1.27
SOX1O00570 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC7.1□□□□□ -1.27
SOX1O00570 AC092709.1-201ENST00000521355 1045 ntBASIC7.1□□□□□ -1.27
SOX1O00570 SMARCE1P4-201ENST00000523647 241 ntBASIC7.1□□□□□ -1.27
SOX1O00570 AP001207.1-201ENST00000524051 481 ntBASIC7.1□□□□□ -1.27
SOX1O00570 AC007956.1-201ENST00000555623 542 ntBASIC7.1□□□□□ -1.27
SOX1O00570 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC7.1□□□□□ -1.27
SOX1O00570 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.1□□□□□ -1.27
SOX1O00570 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.1□□□□□ -1.27
SOX1O00570 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.1□□□□□ -1.27
SOX1O00570 MTCO2P22-201ENST00000603246 681 ntBASIC7.1□□□□□ -1.27
SOX1O00570 AC025449.1-201ENST00000603896 529 ntBASIC7.1□□□□□ -1.27
SOX1O00570 AC112230.1-201ENST00000604342 547 ntBASIC7.1□□□□□ -1.27
SOX1O00570 AC068276.1-201ENST00000605793 379 ntBASIC7.1□□□□□ -1.27
SOX1O00570 SNORA74.4-201ENST00000607595 199 ntBASIC7.1□□□□□ -1.27
SOX1O00570 AC026951.2-201ENST00000613847 241 ntBASIC7.1□□□□□ -1.27
SOX1O00570 AL356321.1-201ENST00000621360 228 ntBASIC7.1□□□□□ -1.27
SOX1O00570 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC7.1□□□□□ -1.27
SOX1O00570 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SOX1O00570 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
SOX1O00570 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.1□□□□□ -1.27
SOX1O00570 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SOX1O00570 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SOX1O00570 ZNF812P-201ENST00000457674 1694 ntBASIC7.09□□□□□ -1.27
SOX1O00570 AL451064.2-201ENST00000623514 1654 ntBASIC7.09□□□□□ -1.27
SOX1O00570 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
SOX1O00570 C4BPAP1-201ENST00000415474 1893 ntBASIC7.09□□□□□ -1.27
SOX1O00570 ABCA11P-202ENST00000504019 2110 ntBASIC7.09□□□□□ -1.27
SOX1O00570 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SOX1O00570 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
SOX1O00570 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.09□□□□□ -1.27
SOX1O00570 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
SOX1O00570 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SOX1O00570 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.09□□□□□ -1.27
SOX1O00570 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SOX1O00570 AC103591.2-201ENST00000265259 766 ntBASIC7.09□□□□□ -1.27
SOX1O00570 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SOX1O00570 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
SOX1O00570 RNY4P24-201ENST00000362735 96 ntBASIC7.09□□□□□ -1.27
SOX1O00570 SNORA38B-201ENST00000363524 131 ntBASIC7.09□□□□□ -1.27
SOX1O00570 U3.7-201ENST00000363668 216 ntBASIC7.09□□□□□ -1.27
SOX1O00570 RNU4-91P-201ENST00000364778 135 ntBASIC7.09□□□□□ -1.27
SOX1O00570 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC7.09□□□□□ -1.27
SOX1O00570 RNY3P10-201ENST00000384764 102 ntBASIC7.09□□□□□ -1.27
SOX1O00570 AL121977.1-201ENST00000401636 979 ntBASIC7.09□□□□□ -1.27
SOX1O00570 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
SOX1O00570 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
SOX1O00570 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.09□□□□□ -1.27
SOX1O00570 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC7.09□□□□□ -1.27
SOX1O00570 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.09□□□□□ -1.27
SOX1O00570 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms