Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC007996.1-201ENST00000620414 2821 ntBASIC5.59□□□□□ -1.51
CCDC188H7C350 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
CCDC188H7C350 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC188H7C350 LYARP1-201ENST00000436977 1501 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CCDC188H7C350 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC188H7C350 AC100778.3-201ENST00000580060 1750 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 AC023421.1-201ENST00000590535 1785 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC188H7C350 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC188H7C350 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CCDC188H7C350 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC188H7C350 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC188H7C350 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC188H7C350 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC188H7C350 MIR621-201ENST00000384919 96 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 MTND3P20-201ENST00000407663 186 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC188H7C350 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC188H7C350 GLUD1P9-201ENST00000420997 1173 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 AC127526.2-201ENST00000426436 775 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.58□□□□□ -1.52
CCDC188H7C350 ARAFP2-201ENST00000440565 559 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 AC114878.1-201ENST00000441166 358 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 AL672138.1-201ENST00000450604 1015 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 AP000547.1-201ENST00000454360 617 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC188H7C350 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.58□□□□□ -1.52
CCDC188H7C350 AC091544.1-201ENST00000484702 348 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 RPL7P41-201ENST00000485823 957 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 AC021006.1-201ENST00000489849 553 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 AL117692.1-201ENST00000494283 713 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC188H7C350 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC188H7C350 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC188H7C350 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC188H7C350 MTND2P13-201ENST00000577438 1039 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 MIR4472-2-201ENST00000582069 67 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 PPATP2-201ENST00000605635 508 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 AC015922.4-201ENST00000612568 690 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC188H7C350 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 AP000648.2-201ENST00000624182 404 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.58□□□□□ -1.52
CCDC188H7C350 AL139254.3-201ENST00000641097 674 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 CASC19-274ENST00000642018 970 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 LINC02019-201ENST00000608605 2060 ntBASIC5.58□□□□□ -1.52
CCDC188H7C350 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC188H7C350 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC188H7C350 AC010266.2-201ENST00000564741 3255 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 AC125336.1-201ENST00000508893 2827 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
CCDC188H7C350 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC188H7C350 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC188H7C350 AC025574.1-201ENST00000554784 1653 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CCDC188H7C350 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CCDC188H7C350 AC005294.1-201ENST00000355509 281 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 RPS3AP2-201ENST00000407190 754 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.57□□□□□ -1.52
CCDC188H7C350 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC188H7C350 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC188H7C350 RNF19BPX-201ENST00000426224 625 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC188H7C350 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC188H7C350 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC188H7C350 GAPDHP58-201ENST00000438477 1006 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 ARL5AP3-201ENST00000439327 386 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 AC073909.1-201ENST00000447112 999 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC188H7C350 NIFKP7-201ENST00000503365 834 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC188H7C350 OR5H7P-201ENST00000514084 930 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 RNU6-615P-201ENST00000516065 106 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 TMEM97P2-201ENST00000517841 403 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC188H7C350 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC188H7C350 IGBP1P1-201ENST00000554337 1009 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 SNORD39.2-201ENST00000579995 76 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 AC015802.2-201ENST00000589690 189 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC188H7C350 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC188H7C350 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC188H7C350 AL596275.2-207ENST00000641188 675 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 AC008691.1-209ENST00000642094 814 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC188H7C350 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC188H7C350 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC188H7C350 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
CCDC188H7C350 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CCDC188H7C350 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC188H7C350 AC015689.2-201ENST00000528172 1738 ntBASIC5.57□□□□□ -1.52
CCDC188H7C350 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC188H7C350 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CCDC188H7C350 MUC2-202ENST00000613187 4845 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 SRRM1P3-201ENST00000426911 2678 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC188H7C350 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC188H7C350 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms