Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 AC023598.1-201ENST00000472521 361 ntBASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 AC084871.2-201ENST00000503355 464 ntBASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 AC095059.2-201ENST00000510601 933 ntBASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 AC027309.2-201ENST00000520566 192 ntBASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 EGLN3P1-201ENST00000541727 720 ntBASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 CYCSP2-201ENST00000558168 301 ntBASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 AC022239.4-201ENST00000602626 504 ntBASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 DLEU1_2.1-201ENST00000617920 342 ntBASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 AC018926.3-201ENST00000618841 406 ntBASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 AC129908.1-201ENST00000624553 648 ntBASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 AL121936.2-201ENST00000641935 662 ntBASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 GDI2P1-201ENST00000429312 1336 ntBASIC7.25□□□□□ -1.25
PCDHGA11Q9Y5H2 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 OR4A15-201ENST00000314706 1035 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 Y_RNA.1-201ENST00000352915 104 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 Y_RNA.279-201ENST00000364763 95 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 KRT18P52-201ENST00000404956 846 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 LARP1P1-201ENST00000407692 292 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 CRIP1P3-201ENST00000416794 220 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 RPL4P4-201ENST00000422486 1284 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AC127526.2-201ENST00000426436 775 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 ARPC3P1-201ENST00000437218 533 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 SNX18P9-201ENST00000440580 835 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 RPS7P5-201ENST00000441482 581 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 PCNPP2-201ENST00000441651 455 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 CALM1P1-201ENST00000442082 433 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 RPL4P2-201ENST00000447259 1282 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 FABP3P2-201ENST00000453169 399 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 RPL26P30-201ENST00000453533 435 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 MRPS21P1-201ENST00000453850 223 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AC239798.3-201ENST00000454459 408 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 RNU7-27P-201ENST00000459281 62 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AC087312.1-201ENST00000471411 480 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AC117394.1-201ENST00000477323 567 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 RPS29P25-201ENST00000481709 171 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 EIF3LP3-201ENST00000495197 822 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 RPL22-208ENST00000497965 786 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AC090638.1-201ENST00000498296 909 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 MTCO3P9-201ENST00000506989 781 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AC112225.1-201ENST00000508230 297 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 Y_RNA.693-201ENST00000516641 110 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 SNX18P27-201ENST00000523611 779 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 OR5AN2P-201ENST00000534535 896 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 ARL2BPP2-201ENST00000550907 489 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AC090415.1-201ENST00000581877 847 ntBASIC7.24□□□□□ -1.25
PCDHGA11Q9Y5H2 AC090774.2-201ENST00000584708 322 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms