Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 AC090142.2-201ENST00000483263 416 ntBASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 RN7SL466P-201ENST00000497546 295 ntBASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 RN7SKP99-201ENST00000517028 307 ntBASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 AC100784.1-201ENST00000522790 310 ntBASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 AC006349.1-201ENST00000555526 235 ntBASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 SETP1-201ENST00000556014 845 ntBASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 RN7SL435P-201ENST00000584418 282 ntBASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 AC010245.2-201ENST00000606908 1167 ntBASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 AL118522.2-201ENST00000616045 615 ntBASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 AC100757.1-201ENST00000616872 1835 ntBASIC4.93□□□□□ -1.62
TRAPPC4Q9Y296 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 AC019072.1-201ENST00000604535 1551 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 AC005522.1-201ENST00000395416 346 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 RPL12P9-201ENST00000412942 488 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 AC104333.2-201ENST00000422630 192 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 RPL19P16-201ENST00000433839 588 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 AL672138.1-201ENST00000450604 1015 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 SETP20-201ENST00000457046 852 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 AC023141.9-201ENST00000458734 412 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 RN7SL51P-201ENST00000468230 285 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 RN7SL717P-201ENST00000478343 297 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 NPM1P29-201ENST00000483112 803 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 AC090638.1-201ENST00000498296 909 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 HMGB1P44-201ENST00000508597 572 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 IMPA1P1-201ENST00000510718 842 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 MTND6P2-201ENST00000512226 524 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 RNU6-1334P-201ENST00000516032 105 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 AC078878.1-201ENST00000539832 958 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 AC060766.1-201ENST00000590824 627 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 WBP1LP8-201ENST00000617401 327 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 AL360270.2-201ENST00000562952 5985 ntBASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
TRAPPC4Q9Y296 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 CASC19-248ENST00000641674 1356 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AL672167.1-204ENST00000641875 3017 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 MIR323A-201ENST00000362199 86 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 SNORD56.6-201ENST00000384569 71 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 PPIAP9-201ENST00000403866 498 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 RPSAP35-201ENST00000413753 818 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 NAP1L4P2-201ENST00000425958 899 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AL389925.1-201ENST00000432257 728 ntBASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.91□□□□□ -1.62
TRAPPC4Q9Y296 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms