Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 PROS2P-201ENST00000474651 1951 ntBASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 AC006484.1-201ENST00000435086 1884 ntBASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CTNNA3Q9UI47 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.46□□□□□ -1.37
CTNNA3Q9UI47 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
CTNNA3Q9UI47 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.46□□□□□ -1.37
CTNNA3Q9UI47 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 SNORA70.6-201ENST00000383934 134 ntBASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 SNORA16A-201ENST00000384342 137 ntBASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 DBIP1-201ENST00000401435 260 ntBASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 AL358178.1-201ENST00000407698 397 ntBASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 PRUNEP1-201ENST00000425846 705 ntBASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 AC009784.1-201ENST00000426484 460 ntBASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 AP000797.2-201ENST00000475768 606 ntBASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 OR2AO1P-201ENST00000476497 403 ntBASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 ASNSP4-201ENST00000511103 447 ntBASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 AP000769.2-201ENST00000602344 396 ntBASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 WBP1LP8-201ENST00000617401 327 ntBASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 SAMMSON-209ENST00000641222 1100 ntBASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.38
CTNNA3Q9UI47 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 AL603750.1-201ENST00000624216 1717 ntBASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 RPL12P18-201ENST00000437175 325 ntBASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 GAPDHP25-201ENST00000447061 1001 ntBASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 RPL7P45-201ENST00000455851 743 ntBASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 OR10G5P-201ENST00000532733 358 ntBASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 MIR1269B-201ENST00000580405 75 ntBASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 RN7SL356P-201ENST00000582228 248 ntBASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 SUGT1P3-202ENST00000604259 383 ntBASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 RNU6-84P-201ENST00000607737 102 ntBASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 AC008833.1-201ENST00000611633 691 ntBASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 AC109583.2-201ENST00000617367 129 ntBASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 GVINP1-202ENST00000531871 7271 ntBASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CTNNA3Q9UI47 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 MTHFD2P5-201ENST00000320415 844 ntBASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 RNA5SP335-201ENST00000363817 110 ntBASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 AL133388.1-201ENST00000404509 287 ntBASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 AL445213.1-201ENST00000412589 747 ntBASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 NPM1P22-201ENST00000427761 952 ntBASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 UBE2V2P4-201ENST00000447495 259 ntBASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 AL606490.1-201ENST00000452266 765 ntBASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 RN7SL184P-201ENST00000488308 297 ntBASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 RN7SL547P-201ENST00000490793 290 ntBASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 RN7SL447P-201ENST00000494711 245 ntBASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 OR8G3P-201ENST00000533406 921 ntBASIC6.44□□□□□ -1.38
CTNNA3Q9UI47 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms