Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RN7SL379P-201ENST00000479912 293 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AC109464.1-201ENST00000511091 819 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AC008837.2-201ENST00000513076 418 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 IGHV1-14-201ENST00000523391 241 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AC024405.1-201ENST00000532521 1042 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AGGF1P7-201ENST00000562369 913 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AC122134.1-201ENST00000565664 1104 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AL031281.1-201ENST00000604049 488 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AL138960.1-201ENST00000613838 513 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AL353726.1-201ENST00000614041 1000 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 uc_338.9-201ENST00000617424 182 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 CLUHP10-201ENST00000631979 980 ntBASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM55Q9BYV6 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 FAM3C2-201ENST00000312214 681 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 RNU4-4P-201ENST00000364588 130 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 ATP5F1P3-201ENST00000397213 657 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AL359715.1-201ENST00000404330 555 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AL033519.1-201ENST00000407266 307 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AL353133.1-201ENST00000407695 401 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 RNA5SP115-201ENST00000411160 107 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AL596448.1-201ENST00000415024 392 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AL663061.1-201ENST00000416625 580 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 GTF2IP23-201ENST00000423746 351 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 CHCHD3P1-201ENST00000425516 676 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 NPM1P22-201ENST00000427761 952 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 FAM96AP1-201ENST00000430879 482 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AL359265.1-201ENST00000440296 795 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 MTND1P29-201ENST00000448112 647 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 RPS26P11-201ENST00000463445 348 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 UOX-201ENST00000471089 899 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 RN7SKP67-201ENST00000515905 235 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 RN7SKP183-201ENST00000517169 324 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 OR8A2P-201ENST00000528631 952 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 OR4C2P-201ENST00000530855 1064 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AP000619.3-201ENST00000535634 1127 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 HMGN2P47-201ENST00000559378 272 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 MIR4433B-201ENST00000581329 102 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AC020914.7-201ENST00000594477 545 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AC069545.1-201ENST00000605671 358 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AL031601.1-201ENST00000605702 394 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AC004908.1-201ENST00000606572 541 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 AL137000.1-201ENST00000610528 1244 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 RN7SL126P-201ENST00000616400 299 ntBASIC6.61□□□□□ -1.35
TRIM55Q9BYV6 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms