Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS13AQ96RL7 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13AQ96RL7 MSL3P1-202ENST00000440028 1468 ntBASIC4.93□□□□□ -1.62
VPS13AQ96RL7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS13AQ96RL7 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13AQ96RL7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS13AQ96RL7 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 ATP5F1P3-201ENST00000397213 657 ntBASIC4.92□□□□□ -1.62
VPS13AQ96RL7 AMZ2P2-201ENST00000406819 1057 ntBASIC4.92□□□□□ -1.62
VPS13AQ96RL7 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 OR51B3P-201ENST00000412287 913 ntBASIC4.92□□□□□ -1.62
VPS13AQ96RL7 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 AC005252.1-201ENST00000604518 1063 ntBASIC4.92□□□□□ -1.62
VPS13AQ96RL7 AC018816.2-201ENST00000621460 353 ntBASIC4.92□□□□□ -1.62
VPS13AQ96RL7 TAF8-201ENST00000372977 6680 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 MIR298-201ENST00000401212 88 ntBASIC4.92□□□□□ -1.62
VPS13AQ96RL7 CEACAMP8-201ENST00000413902 580 ntBASIC4.92□□□□□ -1.62
VPS13AQ96RL7 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 RNGTTP1-201ENST00000420965 728 ntBASIC4.92□□□□□ -1.62
VPS13AQ96RL7 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 RN7SL244P-201ENST00000493405 297 ntBASIC4.92□□□□□ -1.62
VPS13AQ96RL7 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 AC012400.1-201ENST00000518452 381 ntBASIC4.92□□□□□ -1.62
VPS13AQ96RL7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 AC090220.1-201ENST00000593078 1699 ntBASIC4.92□□□□□ -1.62
VPS13AQ96RL7 AC008782.1-201ENST00000603386 430 ntBASIC4.92□□□□□ -1.62
VPS13AQ96RL7 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS13AQ96RL7 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 AL731566.1-201ENST00000620490 1937 ntBASIC4.91□□□□□ -1.62
VPS13AQ96RL7 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 RN7SL188P-201ENST00000469842 285 ntBASIC4.91□□□□□ -1.62
VPS13AQ96RL7 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.91□□□□□ -1.62
VPS13AQ96RL7 NMNAT1P1-201ENST00000554095 876 ntBASIC4.91□□□□□ -1.62
VPS13AQ96RL7 AC039056.2-201ENST00000622261 511 ntBASIC4.91□□□□□ -1.62
VPS13AQ96RL7 MR1-205ENST00000434571 7479 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 CYCSP11-201ENST00000436426 315 ntBASIC4.91□□□□□ -1.62
VPS13AQ96RL7 RPL7L1P8-201ENST00000469911 741 ntBASIC4.91□□□□□ -1.62
VPS13AQ96RL7 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 SLC25A14P1-201ENST00000502867 901 ntBASIC4.91□□□□□ -1.62
VPS13AQ96RL7 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 AC019322.1-201ENST00000571869 389 ntBASIC4.91□□□□□ -1.62
VPS13AQ96RL7 AF131215.7-201ENST00000602443 707 ntBASIC4.91□□□□□ -1.62
VPS13AQ96RL7 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 UGT2B24P-201ENST00000514441 1597 ntBASIC4.91□□□□□ -1.62
VPS13AQ96RL7 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 ZBTB43-201ENST00000373457 5695 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
VPS13AQ96RL7 AC032011.1-201ENST00000611703 1549 ntBASIC4.91□□□□□ -1.62
VPS13AQ96RL7 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms