Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.86□□□□□ -1.15
HLA-CQ95604 NVL-203ENST00000391875 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.86□□□□□ -1.15
HLA-CQ95604 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7.86□□□□□ -1.15
HLA-CQ95604 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC7.86□□□□□ -1.15
HLA-CQ95604 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
HLA-CQ95604 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-CQ95604 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-CQ95604 C8orf44-SGK3-201ENST00000519289 2949 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
HLA-CQ95604 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-CQ95604 MOBP-201ENST00000311042 3388 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
HLA-CQ95604 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC7.85□□□□□ -1.15
HLA-CQ95604 CEP63-201ENST00000332047 2056 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-CQ95604 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC7.85□□□□□ -1.15
HLA-CQ95604 TMEM106A-208ENST00000612339 3266 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
HLA-CQ95604 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
HLA-CQ95604 PRR27-202ENST00000502294 3007 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-CQ95604 AC018880.1-201ENST00000418898 1319 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC7.85□□□□□ -1.15
HLA-CQ95604 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-CQ95604 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.85□□□□□ -1.15
HLA-CQ95604 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-CQ95604 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
HLA-CQ95604 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
HLA-CQ95604 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.85□□□□□ -1.15
HLA-CQ95604 RN7SKP266-201ENST00000410232 287 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 RNU6-195P-201ENST00000411352 109 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.85□□□□□ -1.15
HLA-CQ95604 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.85□□□□□ -1.15
HLA-CQ95604 COX6CP17-201ENST00000421389 185 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 RPL7AP51-201ENST00000422016 760 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 OR51AB1P-201ENST00000429046 620 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 GAPDHP19-201ENST00000431768 1005 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 RPL3P11-201ENST00000434028 1146 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC7.85□□□□□ -1.15
HLA-CQ95604 AL161626.1-201ENST00000441480 490 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 RPL31P44-201ENST00000447680 377 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 EEF1B2P3-201ENST00000447718 678 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 AC006480.1-201ENST00000449887 378 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.85□□□□□ -1.15
HLA-CQ95604 Y_RNA.639-201ENST00000458981 102 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 Y_RNA.632-201ENST00000459189 102 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 RN7SL392P-201ENST00000473024 299 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 MYL6P4-201ENST00000477911 453 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 MTND1P3-201ENST00000484956 952 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 RN7SL170P-201ENST00000487098 295 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
HLA-CQ95604 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC7.85□□□□□ -1.15
HLA-CQ95604 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.85□□□□□ -1.15
HLA-CQ95604 AC098799.3-201ENST00000506095 438 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
HLA-CQ95604 Y_RNA.672-201ENST00000516289 104 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 RNU6-835P-201ENST00000516974 104 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 AC087241.2-201ENST00000535801 324 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 ELOCP31-201ENST00000540463 467 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.85□□□□□ -1.15
HLA-CQ95604 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.85□□□□□ -1.15
HLA-CQ95604 AC005668.1-201ENST00000571142 476 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC7.85□□□□□ -1.15
HLA-CQ95604 AC007448.1-201ENST00000582714 234 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC7.85□□□□□ -1.15
HLA-CQ95604 TPMTP1-201ENST00000592307 737 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 AC097468.3-201ENST00000607956 456 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC7.85□□□□□ -1.15
HLA-CQ95604 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.85□□□□□ -1.15
HLA-CQ95604 ATM-228ENST00000639240 498 ntTSL 5 BASIC7.85□□□□□ -1.15
HLA-CQ95604 AL356585.10-201ENST00000641883 123 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-CQ95604 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-CQ95604 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-CQ95604 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-CQ95604 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-CQ95604 KATNAL2-201ENST00000245121 2833 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-CQ95604 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
HLA-CQ95604 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-CQ95604 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
HLA-CQ95604 AC025574.1-201ENST00000554784 1653 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
HLA-CQ95604 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-CQ95604 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC7.85□□□□□ -1.15
HLA-CQ95604 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-CQ95604 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.85□□□□□ -1.15
HLA-CQ95604 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-CQ95604 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.85□□□□□ -1.15
HLA-CQ95604 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
HLA-CQ95604 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-CQ95604 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
HLA-CQ95604 ICE2P1-201ENST00000512800 1849 ntBASIC7.85□□□□□ -1.15
HLA-CQ95604 NLRP9P1-201ENST00000540920 2655 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms