Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AC093827.1-201ENST00000480094 861 ntBASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 RPL15P21-201ENST00000495592 567 ntBASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AC135626.1-201ENST00000556983 435 ntBASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AC022884.2-201ENST00000578535 580 ntBASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AC107993.1-201ENST00000591343 684 ntBASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AC009027.1-201ENST00000604510 479 ntBASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AC127024.6-201ENST00000621598 424 ntBASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTN4IP1Q8WWV3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 TMSB4XP4-201ENST00000323496 618 ntBASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 AL031985.1-201ENST00000392713 418 ntBASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 EI24P3-201ENST00000399046 1062 ntBASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 DBIP1-201ENST00000401435 260 ntBASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 RN7SKP286-201ENST00000410894 299 ntBASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 AC079807.1-201ENST00000429993 481 ntBASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 RPL12P17-201ENST00000432393 498 ntBASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 PCNPP2-201ENST00000441651 455 ntBASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 AC144530.1-201ENST00000452862 555 ntBASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 KATNBL1P4-201ENST00000503545 918 ntBASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 SUMO2P4-201ENST00000504193 276 ntBASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 MIR4472-2-201ENST00000582069 67 ntBASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 RN7SL787P-201ENST00000613000 284 ntBASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 AL118522.2-201ENST00000616045 615 ntBASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 AP003400.3-201ENST00000624904 346 ntBASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 PROS2P-201ENST00000474651 1951 ntBASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 AC100778.3-201ENST00000580060 1750 ntBASIC4.45□□□□□ -1.7
RTN4IP1Q8WWV3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.44□□□□□ -1.7
RTN4IP1Q8WWV3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
RTN4IP1Q8WWV3 CASC19-248ENST00000641674 1356 ntBASIC4.44□□□□□ -1.7
RTN4IP1Q8WWV3 AL731532.2-201ENST00000623542 1953 ntBASIC4.44□□□□□ -1.7
RTN4IP1Q8WWV3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.44□□□□□ -1.7
RTN4IP1Q8WWV3 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTN4IP1Q8WWV3 RN7SKP15-201ENST00000364742 309 ntBASIC4.44□□□□□ -1.7
RTN4IP1Q8WWV3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTN4IP1Q8WWV3 AC007738.1-201ENST00000413892 348 ntBASIC4.44□□□□□ -1.7
RTN4IP1Q8WWV3 Z93019.1-201ENST00000416450 973 ntBASIC4.44□□□□□ -1.7
RTN4IP1Q8WWV3 AC104333.2-201ENST00000422630 192 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms