Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC027281.1-201ENST00000574178 758 ntBASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 AC108865.2-201ENST00000606881 432 ntBASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 AC091932.2-201ENST00000623014 291 ntBASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC44A1Q8WWI5 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 MRE11P1-201ENST00000464884 2127 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 Y_RNA.110-201ENST00000363220 99 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AL353625.1-202ENST00000366273 571 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 OR7E101P-201ENST00000400428 513 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 CBX1P3-201ENST00000413296 527 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 COX5BP7-201ENST00000414780 274 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AC013470.3-201ENST00000420252 1194 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 IPPKP1-201ENST00000422501 768 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AC092106.1-201ENST00000444291 373 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 MTND5P8-201ENST00000449817 1083 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 PRPF38AP1-201ENST00000451976 933 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AC087672.1-201ENST00000479876 766 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 OR9N1P-201ENST00000491296 333 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 EIF3LP3-201ENST00000495197 822 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AC025458.1-201ENST00000506046 166 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 SNORA26.10-201ENST00000516427 141 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 MTND1P36-201ENST00000522384 936 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 MRPS16P1-201ENST00000523462 412 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 NANOGNBP2-201ENST00000544753 553 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 LINC00557-201ENST00000563184 1279 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AC106730.2-201ENST00000566641 540 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AC024884.1-201ENST00000620583 399 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 AL360270.2-201ENST00000562952 5985 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 ADAM5-202ENST00000399789 1942 ntBASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A1Q8WWI5 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 AC087565.3-202ENST00000642085 1603 ntBASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 AL353796.1-201ENST00000561542 3241 ntBASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 AL022311.1-201ENST00000623726 19416 ntBASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 RNU6-1331P-201ENST00000363658 106 ntBASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 RNA5SP131-201ENST00000365452 119 ntBASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
SLC44A1Q8WWI5 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 288 ms