Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 AC087575.1-201ENST00000585087 229 ntBASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 AL078623.1-201ENST00000602702 907 ntBASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 SMIM12P1-201ENST00000603004 274 ntBASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 RN7SKP299-201ENST00000606679 301 ntBASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 AC055764.2-201ENST00000610089 670 ntBASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 AC015540.1-201ENST00000615828 501 ntBASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 AC018926.3-201ENST00000618841 406 ntBASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 AC019226.1-201ENST00000625666 515 ntBASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 DBF4P1-201ENST00000412976 1892 ntBASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 AC109315.1-201ENST00000584143 1347 ntBASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 AC011477.1-204ENST00000623416 1325 ntBASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 ASNSP6-201ENST00000592770 1618 ntBASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 IL24-207ENST00000611909 1621 ntTSL 3 BASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPAS4Q8IUM7 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AC104837.1-201ENST00000444644 1587 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AC093225.1-201ENST00000506867 1408 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 CGA-201ENST00000369582 729 ntTSL 5 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 RNU6-317P-201ENST00000384031 107 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 MIR323B-201ENST00000385269 82 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 YWHAZP6-201ENST00000399764 738 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 RN7SKP240-201ENST00000410583 375 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 DNAJA1P2-201ENST00000421360 1197 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AC012519.1-201ENST00000424588 610 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 C8orf59P1-201ENST00000429930 303 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 SCP2-206ENST00000430330 938 ntTSL 2 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 MED14P1-201ENST00000430517 648 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AL050321.1-201ENST00000432363 400 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AC245047.1-201ENST00000433276 873 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AC093155.1-201ENST00000440164 826 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AL390728.3-201ENST00000452704 270 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 RPL23AP12-201ENST00000467573 473 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AC020937.1-201ENST00000519677 1013 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 MTCYBP41-201ENST00000528913 1123 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 DYNLL1P1-201ENST00000595442 269 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AC133552.5-201ENST00000604266 540 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AL135999.3-201ENST00000610501 812 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 Z99129.4-201ENST00000624649 2435 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 AC132219.2-201ENST00000624416 2327 ntBASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.22□□□□□ -1.25
NPAS4Q8IUM7 COL6A4P1-202ENST00000487147 4317 ntBASIC7.21□□□□□ -1.25
NPAS4Q8IUM7 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.25
NPAS4Q8IUM7 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.21□□□□□ -1.25
NPAS4Q8IUM7 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
NPAS4Q8IUM7 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NPAS4Q8IUM7 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms