Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
C11orf88Q6PI97 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.11□□□□□ -1.59
C11orf88Q6PI97 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.11□□□□□ -1.59
C11orf88Q6PI97 AC090971.4-201ENST00000560291 1800 ntBASIC5.11□□□□□ -1.59
C11orf88Q6PI97 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
C11orf88Q6PI97 ASNSP1-201ENST00000518311 1939 ntBASIC5.11□□□□□ -1.59
C11orf88Q6PI97 SMG1P4-204ENST00000523028 4131 ntBASIC5.11□□□□□ -1.59
C11orf88Q6PI97 AC005224.3-201ENST00000584683 2140 ntBASIC5.11□□□□□ -1.59
C11orf88Q6PI97 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
C11orf88Q6PI97 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
C11orf88Q6PI97 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
C11orf88Q6PI97 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC019155.1-201ENST00000382242 574 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 RNU6-452P-201ENST00000384406 107 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC003045.1-201ENST00000398779 713 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AL160175.1-201ENST00000428124 247 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 RPL6P30-201ENST00000443382 862 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 COX4I1P2-201ENST00000447446 547 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 MTND2P25-201ENST00000449028 610 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 RARRES2P3-201ENST00000457739 473 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 RN7SL197P-201ENST00000466981 299 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC025181.1-201ENST00000477507 416 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 GM2AP2-201ENST00000491764 562 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC090568.1-201ENST00000509499 856 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 RNU6-1004P-201ENST00000516584 111 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC090888.3-201ENST00000558917 509 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC007346.2-201ENST00000564816 892 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC134669.1-201ENST00000581275 672 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AP001029.2-203ENST00000589795 4910 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 SUMO2P14-201ENST00000604488 293 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC073046.2-201ENST00000604756 527 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC010200.2-201ENST00000605098 235 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC242628.1-201ENST00000606810 391 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC016583.1-201ENST00000624221 2431 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 AC006453.5-201ENST00000636451 619 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 MAPK10-328ENST00000641553 4009 ntBASIC5.1□□□□□ -1.59
C11orf88Q6PI97 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
C11orf88Q6PI97 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.09□□□□□ -1.59
C11orf88Q6PI97 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
C11orf88Q6PI97 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
C11orf88Q6PI97 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
C11orf88Q6PI97 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
C11orf88Q6PI97 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
C11orf88Q6PI97 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.09□□□□□ -1.59
C11orf88Q6PI97 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
C11orf88Q6PI97 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
C11orf88Q6PI97 AC104966.1-201ENST00000467010 1464 ntBASIC5.09□□□□□ -1.59
C11orf88Q6PI97 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
C11orf88Q6PI97 RPL11P4-201ENST00000332269 436 ntBASIC5.09□□□□□ -1.59
C11orf88Q6PI97 RNFT1P3-201ENST00000340898 1052 ntBASIC5.09□□□□□ -1.59
C11orf88Q6PI97 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.09□□□□□ -1.59
C11orf88Q6PI97 SNORA43.1-201ENST00000364863 140 ntBASIC5.09□□□□□ -1.59
C11orf88Q6PI97 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
C11orf88Q6PI97 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.09□□□□□ -1.59
C11orf88Q6PI97 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
C11orf88Q6PI97 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
C11orf88Q6PI97 RNA5SP431-201ENST00000410312 120 ntBASIC5.09□□□□□ -1.59
C11orf88Q6PI97 MYL6P5-201ENST00000412707 459 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms