Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 SNORA70D-201ENST00000578836 135 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 MIR4999-201ENST00000585029 91 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 RPL7AP69-201ENST00000595306 806 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 AL356986.1-201ENST00000604085 341 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 AC009994.1-201ENST00000606889 253 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 AL391497.1-201ENST00000608671 547 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 PART1_1.1-201ENST00000611761 217 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 AC007014.2-201ENST00000615581 479 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 AC131009.3-201ENST00000621809 287 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 AC073592.6-201ENST00000624271 415 ntBASIC7.07□□□□□ -1.28
RNF43Q68DV7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF43Q68DV7 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF43Q68DV7 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF43Q68DV7 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF43Q68DV7 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF43Q68DV7 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF43Q68DV7 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 AC217777.1-201ENST00000570034 1471 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF43Q68DV7 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF43Q68DV7 AL359694.2-201ENST00000567753 1615 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF43Q68DV7 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF43Q68DV7 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF43Q68DV7 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF43Q68DV7 AC010894.1-201ENST00000313760 361 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF43Q68DV7 SNORA7A-201ENST00000384765 139 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 MIR541-201ENST00000401360 84 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 USP9YP6-201ENST00000413550 854 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 MTND4LP17-201ENST00000414607 293 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 RPS7P9-201ENST00000414704 586 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 NPM1P36-201ENST00000415681 835 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 RPS10P21-201ENST00000430654 475 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 USP9YP34-201ENST00000453983 808 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 AC104339.1-201ENST00000465478 348 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 AC004924.1-201ENST00000480160 781 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 AC005363.1-201ENST00000530779 351 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 AP000662.1-201ENST00000530952 487 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 TOMM20P1-201ENST00000534518 427 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 MT1CP-201ENST00000567054 174 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 ROCK1P1-201ENST00000573767 549 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 ISCA1P3-201ENST00000577104 373 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 RN7SL622P-201ENST00000585292 275 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 AC020914.7-201ENST00000594477 545 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 AC006539.2-201ENST00000601729 572 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 AL121655.1-201ENST00000605811 308 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 AL139418.1-201ENST00000613613 177 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 AL121873.1-201ENST00000616013 524 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 RMST_10.1-201ENST00000616309 154 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 AC068213.1-201ENST00000625124 226 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 SNORA16A-202ENST00000628458 135 ntBASIC7.06□□□□□ -1.28
RNF43Q68DV7 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF43Q68DV7 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.06□□□□□ -1.28
RNF43Q68DV7 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF43Q68DV7 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF43Q68DV7 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF43Q68DV7 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 EPS15P1-202ENST00000459691 2071 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms