Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC8.43□□□□□ -1.06
SNAPC4Q5SXM2 KPNA2P3-201ENST00000584190 848 ntBASIC8.43□□□□□ -1.06
SNAPC4Q5SXM2 AC021106.3-201ENST00000623925 531 ntBASIC8.43□□□□□ -1.06
SNAPC4Q5SXM2 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
SNAPC4Q5SXM2 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 ALB-214ENST00000509063 1911 ntTSL 5 BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 CASC19-243ENST00000641588 1546 ntBASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 RNU4-39P-201ENST00000362455 127 ntBASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 RPL23AP1-201ENST00000428990 471 ntBASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 AURKAPS2-201ENST00000454983 333 ntBASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 NIP7P2-201ENST00000485801 544 ntBASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 AK3P4-201ENST00000504283 583 ntBASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 AC010350.1-201ENST00000504908 231 ntBASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 NMNAT1P1-201ENST00000554095 876 ntBASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 AC020910.3-201ENST00000603701 874 ntBASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 AC005377.1-201ENST00000605126 456 ntBASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 AC092653.1-201ENST00000608509 531 ntBASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 AP003400.3-201ENST00000624904 346 ntBASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 AL117378.2-201ENST00000622916 1337 ntBASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 AL137100.1-201ENST00000556703 1620 ntBASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SNAPC4Q5SXM2 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 UGT2B24P-201ENST00000514441 1597 ntBASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 RNA5SP388-201ENST00000362584 119 ntBASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 RPL12P43-201ENST00000420608 499 ntBASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 CENPIP1-201ENST00000425713 902 ntBASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 AC010326.1-201ENST00000462726 602 ntBASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 SCARNA20.4-201ENST00000516969 131 ntBASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 RN7SKP92-201ENST00000517266 244 ntBASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 MAL2-201ENST00000522112 573 ntTSL 4 BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 GMFG-202ENST00000594700 397 ntTSL 2 BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 SELE-204ENST00000367776 3576 ntTSL 5 BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 SELE-205ENST00000367777 3576 ntTSL 5 BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SNAPC4Q5SXM2 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNAPC4Q5SXM2 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNAPC4Q5SXM2 IQCB2P-201ENST00000401788 1633 ntBASIC8.4□□□□□ -1.06
SNAPC4Q5SXM2 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC8.4□□□□□ -1.06
SNAPC4Q5SXM2 CCT8P1-201ENST00000413611 1657 ntBASIC8.4□□□□□ -1.06
SNAPC4Q5SXM2 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNAPC4Q5SXM2 RSU1P3-201ENST00000412878 835 ntBASIC8.4□□□□□ -1.06
SNAPC4Q5SXM2 GTF2IP5-201ENST00000414608 731 ntBASIC8.4□□□□□ -1.06
SNAPC4Q5SXM2 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC8.4□□□□□ -1.06
SNAPC4Q5SXM2 TXNP2-201ENST00000443918 295 ntBASIC8.4□□□□□ -1.06
SNAPC4Q5SXM2 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC8.4□□□□□ -1.06
SNAPC4Q5SXM2 CEACAMP6-201ENST00000452007 574 ntBASIC8.4□□□□□ -1.06
SNAPC4Q5SXM2 AC091912.1-201ENST00000511351 248 ntBASIC8.4□□□□□ -1.06
SNAPC4Q5SXM2 AL109766.1-201ENST00000555080 552 ntBASIC8.4□□□□□ -1.06
SNAPC4Q5SXM2 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC8.4□□□□□ -1.06
SNAPC4Q5SXM2 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC8.4□□□□□ -1.06
SNAPC4Q5SXM2 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC8.4□□□□□ -1.06
SNAPC4Q5SXM2 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SNAPC4Q5SXM2 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
SNAPC4Q5SXM2 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SNAPC4Q5SXM2 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC8.4□□□□□ -1.07
SNAPC4Q5SXM2 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.4□□□□□ -1.07
SNAPC4Q5SXM2 AC100757.1-201ENST00000616872 1835 ntBASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 AC016251.2-201ENST00000623393 3089 ntBASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 GNG5P2-201ENST00000372054 207 ntBASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 SOX5P1-201ENST00000524155 1127 ntBASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 IPO5-229ENST00000631030 192 ntTSL 5 BASIC8.39□□□□□ -1.07
SNAPC4Q5SXM2 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms