Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
RBM48Q5RL73 RPL29P23-201ENST00000486188 442 ntBASIC4.78□□□□□ -1.64
RBM48Q5RL73 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.78□□□□□ -1.64
RBM48Q5RL73 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RBM48Q5RL73 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC4.78□□□□□ -1.64
RBM48Q5RL73 ENPP7P9-201ENST00000514456 627 ntBASIC4.78□□□□□ -1.64
RBM48Q5RL73 HMGB1P19-201ENST00000517578 577 ntBASIC4.78□□□□□ -1.64
RBM48Q5RL73 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.78□□□□□ -1.64
RBM48Q5RL73 EIF4A2P5-201ENST00000529914 499 ntBASIC4.78□□□□□ -1.64
RBM48Q5RL73 AC008126.1-201ENST00000549019 480 ntBASIC4.78□□□□□ -1.64
RBM48Q5RL73 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RBM48Q5RL73 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.78□□□□□ -1.64
RBM48Q5RL73 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.78□□□□□ -1.64
RBM48Q5RL73 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.78□□□□□ -1.64
RBM48Q5RL73 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.78□□□□□ -1.64
RBM48Q5RL73 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.78□□□□□ -1.64
RBM48Q5RL73 uc_338.31-201ENST00000615595 186 ntBASIC4.78□□□□□ -1.64
RBM48Q5RL73 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.78□□□□□ -1.64
RBM48Q5RL73 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.78□□□□□ -1.64
RBM48Q5RL73 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.78□□□□□ -1.64
RBM48Q5RL73 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RBM48Q5RL73 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RBM48Q5RL73 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RBM48Q5RL73 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RBM48Q5RL73 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
RBM48Q5RL73 AL133268.1-201ENST00000405676 1401 ntBASIC4.78□□□□□ -1.64
RBM48Q5RL73 SCN1A-220ENST00000641603 12506 ntBASIC4.78□□□□□ -1.64
RBM48Q5RL73 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.78□□□□□ -1.64
RBM48Q5RL73 AP000542.2-201ENST00000623199 6179 ntBASIC4.78□□□□□ -1.64
RBM48Q5RL73 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RBM48Q5RL73 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RBM48Q5RL73 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RBM48Q5RL73 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 RBBP4P5-201ENST00000398583 1266 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 AP000580.1-201ENST00000404439 358 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 AL390316.1-201ENST00000406279 553 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RBM48Q5RL73 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 AL139158.1-201ENST00000424719 340 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 AL161722.2-201ENST00000434731 981 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 RPL12P49-201ENST00000441100 121 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RBM48Q5RL73 AC007383.1-201ENST00000445875 636 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 AL672138.1-201ENST00000450604 1015 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 AC009963.3-201ENST00000458090 486 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 AC022795.1-201ENST00000473808 480 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 OR2A3P-201ENST00000493774 953 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 TCP11X3P-202ENST00000514289 1254 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 IGKV3D-25-201ENST00000519599 235 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 CASP1P2-201ENST00000526830 1258 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 AC007956.1-201ENST00000555623 542 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 AL390334.1-201ENST00000556395 450 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 AC002519.2-203ENST00000567043 837 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 AC074140.1-201ENST00000621617 208 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RBM48Q5RL73 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RBM48Q5RL73 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 MAPK10-320ENST00000641462 6696 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.77□□□□□ -1.65
RBM48Q5RL73 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RBM48Q5RL73 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RBM48Q5RL73 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RBM48Q5RL73 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RBM48Q5RL73 LYARP1-201ENST00000436977 1501 ntBASIC4.77□□□□□ -1.65
RBM48Q5RL73 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RBM48Q5RL73 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
RBM48Q5RL73 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RBM48Q5RL73 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RBM48Q5RL73 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RBM48Q5RL73 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RBM48Q5RL73 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.76□□□□□ -1.65
RBM48Q5RL73 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RBM48Q5RL73 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RBM48Q5RL73 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RBM48Q5RL73 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.76□□□□□ -1.65
RBM48Q5RL73 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.76□□□□□ -1.65
RBM48Q5RL73 SOCS5P3-201ENST00000425115 1576 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms