Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.59□□□□□ -1.03
CDCA8Q53HL2 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC8.59□□□□□ -1.03
CDCA8Q53HL2 AC022507.1-201ENST00000548349 1505 ntBASIC8.59□□□□□ -1.03
CDCA8Q53HL2 AP000866.6-201ENST00000638898 3579 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 SNORD8-201ENST00000363915 110 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 RPS3AP26-201ENST00000398259 784 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 ERHP2-201ENST00000402323 299 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 NUDT19P3-201ENST00000404698 555 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 Z75741.2-201ENST00000417272 1167 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 RPS7P8-201ENST00000418311 581 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 ATP5A1P8-201ENST00000423669 1291 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 AC010153.1-201ENST00000432862 727 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 NPM1P33-201ENST00000438918 872 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 CUBNP2-201ENST00000443534 1139 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 USP9YP10-201ENST00000454868 628 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 USP9YP5-201ENST00000511770 630 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 RN7SKP35-201ENST00000517210 151 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 IGKV3D-25-201ENST00000519599 235 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 AC087465.1-201ENST00000560574 245 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 AC015688.2-201ENST00000584523 262 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 AC064872.1-201ENST00000604823 1072 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 AC009237.15-201ENST00000610252 501 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 AC015660.5-201ENST00000623238 564 ntBASIC8.58□□□□□ -1.04
CDCA8Q53HL2 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC8.58□□□□□ -1.04
CDCA8Q53HL2 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 NAMPTP1-201ENST00000440465 2514 ntBASIC8.57□□□□□ -1.04
CDCA8Q53HL2 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AL590084.1-201ENST00000407885 387 ntBASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 RPL35AP31-201ENST00000418340 337 ntBASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AC117394.1-201ENST00000477323 567 ntBASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AC069528.1-202ENST00000482888 637 ntBASIC8.57□□□□□ -1.04
CDCA8Q53HL2 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AC011352.1-201ENST00000512300 793 ntBASIC8.57□□□□□ -1.04
CDCA8Q53HL2 MTCO2P32-201ENST00000514865 403 ntBASIC8.57□□□□□ -1.04
CDCA8Q53HL2 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 PDCL2P2-201ENST00000533651 189 ntBASIC8.57□□□□□ -1.04
CDCA8Q53HL2 BICD1-206ENST00000551086 423 ntTSL 3 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 MRPS21P9-201ENST00000571150 257 ntBASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AC008507.3-201ENST00000585753 472 ntBASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AC011497.2-201ENST00000600255 639 ntBASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AC021749.1-201ENST00000604322 607 ntBASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AL021368.3-201ENST00000607119 578 ntBASIC8.57□□□□□ -1.04
CDCA8Q53HL2 MIR6071-201ENST00000616741 78 ntBASIC8.57□□□□□ -1.04
CDCA8Q53HL2 AC079248.2-201ENST00000623779 326 ntBASIC8.57□□□□□ -1.04
CDCA8Q53HL2 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms