Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CBX1P83916 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.44□□□□□ -1.54
CBX1P83916 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CBX1P83916 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.44□□□□□ -1.54
CBX1P83916 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.44□□□□□ -1.54
CBX1P83916 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.44□□□□□ -1.54
CBX1P83916 AC135626.1-201ENST00000556983 435 ntBASIC5.44□□□□□ -1.54
CBX1P83916 CYCSP40-201ENST00000575927 294 ntBASIC5.44□□□□□ -1.54
CBX1P83916 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.44□□□□□ -1.54
CBX1P83916 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.44□□□□□ -1.54
CBX1P83916 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.44□□□□□ -1.54
CBX1P83916 MIR6070-201ENST00000613967 103 ntBASIC5.44□□□□□ -1.54
CBX1P83916 AC009237.17-201ENST00000618111 748 ntBASIC5.44□□□□□ -1.54
CBX1P83916 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CBX1P83916 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CBX1P83916 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
CBX1P83916 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.44□□□□□ -1.54
CBX1P83916 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CBX1P83916 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CBX1P83916 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CBX1P83916 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CBX1P83916 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
CBX1P83916 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CBX1P83916 CUL4AP1-201ENST00000514750 1863 ntBASIC5.43□□□□□ -1.54
CBX1P83916 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CBX1P83916 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.43□□□□□ -1.54
CBX1P83916 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CBX1P83916 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CBX1P83916 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CBX1P83916 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CBX1P83916 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CBX1P83916 SEPT7P8-201ENST00000413308 775 ntBASIC5.43□□□□□ -1.54
CBX1P83916 RPL35AP3-201ENST00000414680 288 ntBASIC5.43□□□□□ -1.54
CBX1P83916 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.43□□□□□ -1.54
CBX1P83916 TMBIM7P-201ENST00000418074 855 ntBASIC5.43□□□□□ -1.54
CBX1P83916 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.43□□□□□ -1.54
CBX1P83916 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CBX1P83916 RPS19P6-201ENST00000441327 433 ntBASIC5.43□□□□□ -1.54
CBX1P83916 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.43□□□□□ -1.54
CBX1P83916 BX842559.2-201ENST00000451418 605 ntBASIC5.43□□□□□ -1.54
CBX1P83916 OR52Y1P-201ENST00000452418 828 ntBASIC5.43□□□□□ -1.54
CBX1P83916 RN7SL269P-201ENST00000467795 305 ntBASIC5.43□□□□□ -1.54
CBX1P83916 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.43□□□□□ -1.54
CBX1P83916 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.43□□□□□ -1.54
CBX1P83916 AC022133.1-201ENST00000490961 571 ntBASIC5.43□□□□□ -1.54
CBX1P83916 AC073073.1-201ENST00000493920 463 ntBASIC5.43□□□□□ -1.54
CBX1P83916 AC122714.1-201ENST00000502510 459 ntBASIC5.43□□□□□ -1.54
CBX1P83916 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.43□□□□□ -1.54
CBX1P83916 AC074087.1-201ENST00000512059 724 ntBASIC5.43□□□□□ -1.54
CBX1P83916 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.43□□□□□ -1.54
CBX1P83916 AC022360.1-201ENST00000521058 340 ntBASIC5.43□□□□□ -1.54
CBX1P83916 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.43□□□□□ -1.54
CBX1P83916 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.43□□□□□ -1.54
CBX1P83916 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.43□□□□□ -1.54
CBX1P83916 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.43□□□□□ -1.54
CBX1P83916 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.43□□□□□ -1.54
CBX1P83916 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.43□□□□□ -1.54
CBX1P83916 AC037479.1-201ENST00000558361 625 ntBASIC5.43□□□□□ -1.54
CBX1P83916 AP005403.1-201ENST00000579720 229 ntBASIC5.43□□□□□ -1.54
CBX1P83916 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.43□□□□□ -1.54
CBX1P83916 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.43□□□□□ -1.54
CBX1P83916 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.43□□□□□ -1.54
CBX1P83916 VN1R81P-201ENST00000602085 372 ntBASIC5.43□□□□□ -1.54
CBX1P83916 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.43□□□□□ -1.54
CBX1P83916 LINC00901.1-201ENST00000617252 152 ntBASIC5.43□□□□□ -1.54
CBX1P83916 AC005086.4-201ENST00000623065 213 ntBASIC5.43□□□□□ -1.54
CBX1P83916 AP003400.3-201ENST00000624904 346 ntBASIC5.43□□□□□ -1.54
CBX1P83916 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CBX1P83916 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CBX1P83916 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.43□□□□□ -1.54
CBX1P83916 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CBX1P83916 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CBX1P83916 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CBX1P83916 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CBX1P83916 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CBX1P83916 AC233968.1-201ENST00000611212 1300 ntBASIC5.43□□□□□ -1.54
CBX1P83916 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.43□□□□□ -1.54
CBX1P83916 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CBX1P83916 CDC27P2-201ENST00000425026 1922 ntBASIC5.42□□□□□ -1.54
CBX1P83916 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CBX1P83916 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.42□□□□□ -1.54
CBX1P83916 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CBX1P83916 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.42□□□□□ -1.54
CBX1P83916 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CBX1P83916 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CBX1P83916 RPL11P4-201ENST00000332269 436 ntBASIC5.42□□□□□ -1.54
CBX1P83916 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CBX1P83916 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.42□□□□□ -1.54
CBX1P83916 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CBX1P83916 AP000580.1-201ENST00000404439 358 ntBASIC5.42□□□□□ -1.54
CBX1P83916 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CBX1P83916 AL035079.1-201ENST00000405210 287 ntBASIC5.42□□□□□ -1.54
CBX1P83916 ZNF37CP-201ENST00000406795 241 ntBASIC5.42□□□□□ -1.54
CBX1P83916 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.42□□□□□ -1.54
CBX1P83916 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.42□□□□□ -1.54
CBX1P83916 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.42□□□□□ -1.54
CBX1P83916 AL360013.1-201ENST00000419031 858 ntBASIC5.42□□□□□ -1.54
CBX1P83916 AC006509.1-201ENST00000420788 634 ntBASIC5.42□□□□□ -1.54
CBX1P83916 KIF4CP-201ENST00000422742 1279 ntBASIC5.42□□□□□ -1.54
CBX1P83916 TRGV7-201ENST00000427089 353 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms