Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC008115.3-201ENST00000614874 549 ntBASIC4.7□□□□□ -1.66
UBA52P62987 AC007683.2-201ENST00000624681 714 ntBASIC4.7□□□□□ -1.66
UBA52P62987 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.7□□□□□ -1.66
UBA52P62987 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.7□□□□□ -1.66
UBA52P62987 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
UBA52P62987 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
UBA52P62987 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
UBA52P62987 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
UBA52P62987 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
UBA52P62987 AC117409.1-201ENST00000470499 1310 ntBASIC4.7□□□□□ -1.66
UBA52P62987 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
UBA52P62987 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
UBA52P62987 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UBA52P62987 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UBA52P62987 AC104964.3-201ENST00000606115 2860 ntBASIC4.69□□□□□ -1.66
UBA52P62987 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.69□□□□□ -1.66
UBA52P62987 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.69□□□□□ -1.66
UBA52P62987 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.69□□□□□ -1.66
UBA52P62987 SNORA48.4-201ENST00000391089 134 ntBASIC4.69□□□□□ -1.66
UBA52P62987 RN7SKP29-201ENST00000410957 272 ntBASIC4.69□□□□□ -1.66
UBA52P62987 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.69□□□□□ -1.66
UBA52P62987 OR6E1P-201ENST00000414424 923 ntBASIC4.69□□□□□ -1.66
UBA52P62987 RPS4XP5-201ENST00000419038 768 ntBASIC4.69□□□□□ -1.66
UBA52P62987 OR6C64P-201ENST00000419708 825 ntBASIC4.69□□□□□ -1.66
UBA52P62987 AC099677.3-201ENST00000427081 395 ntBASIC4.69□□□□□ -1.66
UBA52P62987 CFL1P1-202ENST00000432948 411 ntBASIC4.69□□□□□ -1.66
UBA52P62987 DEFA9P-201ENST00000433042 285 ntBASIC4.69□□□□□ -1.66
UBA52P62987 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.69□□□□□ -1.66
UBA52P62987 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.69□□□□□ -1.66
UBA52P62987 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.69□□□□□ -1.66
UBA52P62987 AL606490.1-201ENST00000452266 765 ntBASIC4.69□□□□□ -1.66
UBA52P62987 COPS8P2-201ENST00000473228 627 ntBASIC4.69□□□□□ -1.66
UBA52P62987 RPS17P15-201ENST00000475609 349 ntBASIC4.69□□□□□ -1.66
UBA52P62987 OR2AO1P-201ENST00000476497 403 ntBASIC4.69□□□□□ -1.66
UBA52P62987 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UBA52P62987 OR5M14P-201ENST00000506803 618 ntBASIC4.69□□□□□ -1.66
UBA52P62987 AC105384.2-201ENST00000508433 640 ntBASIC4.69□□□□□ -1.66
UBA52P62987 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.69□□□□□ -1.66
UBA52P62987 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.69□□□□□ -1.66
UBA52P62987 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.69□□□□□ -1.66
UBA52P62987 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.69□□□□□ -1.66
UBA52P62987 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.69□□□□□ -1.66
UBA52P62987 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.69□□□□□ -1.66
UBA52P62987 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.69□□□□□ -1.66
UBA52P62987 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
UBA52P62987 MIR4260-201ENST00000583107 67 ntBASIC4.69□□□□□ -1.66
UBA52P62987 IMMP1LP3-201ENST00000604197 224 ntBASIC4.69□□□□□ -1.66
UBA52P62987 AC004948.1-201ENST00000609858 672 ntBASIC4.69□□□□□ -1.66
UBA52P62987 AC016769.4-201ENST00000616893 535 ntBASIC4.69□□□□□ -1.66
UBA52P62987 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UBA52P62987 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UBA52P62987 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
UBA52P62987 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
UBA52P62987 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
UBA52P62987 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UBA52P62987 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.69□□□□□ -1.66
UBA52P62987 AC114947.2-201ENST00000565748 2125 ntBASIC4.69□□□□□ -1.66
UBA52P62987 C4BPAP1-201ENST00000415474 1893 ntBASIC4.69□□□□□ -1.66
UBA52P62987 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UBA52P62987 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
UBA52P62987 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
UBA52P62987 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.68□□□□□ -1.66
UBA52P62987 AL590763.1-201ENST00000398297 1545 ntBASIC4.68□□□□□ -1.66
UBA52P62987 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.68□□□□□ -1.66
UBA52P62987 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.68□□□□□ -1.66
UBA52P62987 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.68□□□□□ -1.66
UBA52P62987 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.68□□□□□ -1.66
UBA52P62987 UBBP2-201ENST00000376781 231 ntBASIC4.68□□□□□ -1.66
UBA52P62987 SNORA70-201ENST00000384436 135 ntBASIC4.68□□□□□ -1.66
UBA52P62987 AL359643.1-201ENST00000404109 423 ntBASIC4.68□□□□□ -1.66
UBA52P62987 MIR1271-201ENST00000408537 86 ntBASIC4.68□□□□□ -1.66
UBA52P62987 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.68□□□□□ -1.66
UBA52P62987 NANOGP4-201ENST00000427230 913 ntBASIC4.68□□□□□ -1.66
UBA52P62987 TMEM183AP1-205ENST00000432739 290 ntBASIC4.68□□□□□ -1.66
UBA52P62987 FMO7P-201ENST00000436045 768 ntBASIC4.68□□□□□ -1.66
UBA52P62987 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.68□□□□□ -1.66
UBA52P62987 AC005297.1-201ENST00000444765 862 ntBASIC4.68□□□□□ -1.66
UBA52P62987 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.68□□□□□ -1.66
UBA52P62987 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.68□□□□□ -1.66
UBA52P62987 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.68□□□□□ -1.66
UBA52P62987 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
UBA52P62987 RPS7P6-201ENST00000485777 579 ntBASIC4.68□□□□□ -1.66
UBA52P62987 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.68□□□□□ -1.66
UBA52P62987 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.68□□□□□ -1.66
UBA52P62987 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.68□□□□□ -1.66
UBA52P62987 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.68□□□□□ -1.66
UBA52P62987 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.68□□□□□ -1.66
UBA52P62987 GTF2IP11-201ENST00000526931 420 ntBASIC4.68□□□□□ -1.66
UBA52P62987 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.68□□□□□ -1.66
UBA52P62987 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.68□□□□□ -1.66
UBA52P62987 OR7A8P-201ENST00000595427 913 ntBASIC4.68□□□□□ -1.66
UBA52P62987 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.68□□□□□ -1.66
UBA52P62987 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.68□□□□□ -1.66
UBA52P62987 AC145423.1-201ENST00000605712 336 ntBASIC4.68□□□□□ -1.66
UBA52P62987 AC007204.2-201ENST00000615022 616 ntBASIC4.68□□□□□ -1.66
UBA52P62987 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
UBA52P62987 AC073429.2-201ENST00000569694 1444 ntBASIC4.68□□□□□ -1.66
UBA52P62987 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
UBA52P62987 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.68□□□□□ -1.66
UBA52P62987 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms