Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.54□□□□□ -1.52
CLDN2P57739 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.54□□□□□ -1.52
CLDN2P57739 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.54□□□□□ -1.52
CLDN2P57739 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN2P57739 AL139022.2-201ENST00000606934 443 ntBASIC5.54□□□□□ -1.52
CLDN2P57739 AC004775.1-201ENST00000607389 753 ntBASIC5.54□□□□□ -1.52
CLDN2P57739 AC211433.2-201ENST00000608433 387 ntBASIC5.54□□□□□ -1.52
CLDN2P57739 AL645927.2-201ENST00000618350 349 ntBASIC5.54□□□□□ -1.52
CLDN2P57739 AL163051.2-201ENST00000618976 735 ntBASIC5.54□□□□□ -1.52
CLDN2P57739 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN2P57739 MIR6837-201ENST00000620884 64 ntBASIC5.54□□□□□ -1.52
CLDN2P57739 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN2P57739 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN2P57739 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN2P57739 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.54□□□□□ -1.52
CLDN2P57739 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN2P57739 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN2P57739 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN2P57739 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CLDN2P57739 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CLDN2P57739 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN2P57739 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.54□□□□□ -1.52
CLDN2P57739 AC087516.1-201ENST00000561236 2428 ntBASIC5.54□□□□□ -1.52
CLDN2P57739 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN2P57739 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN2P57739 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CLDN2P57739 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.54□□□□□ -1.52
CLDN2P57739 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.54□□□□□ -1.52
CLDN2P57739 AL590763.1-201ENST00000398297 1545 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN2P57739 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN2P57739 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLDN2P57739 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN2P57739 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN2P57739 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN2P57739 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN2P57739 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.53□□□□□ -1.52
CLDN2P57739 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.53□□□□□ -1.52
CLDN2P57739 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN2P57739 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN2P57739 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN2P57739 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CLDN2P57739 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CLDN2P57739 RPL10P10-201ENST00000403509 664 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN2P57739 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN2P57739 VN1R21P-201ENST00000426703 765 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 USP24P1-201ENST00000433802 779 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 AL627308.1-201ENST00000435693 821 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 LDHAP2-201ENST00000437325 985 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN2P57739 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN2P57739 AL627224.1-201ENST00000448334 444 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 RPL7P45-201ENST00000455851 743 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 EIF2S2P5-201ENST00000457635 968 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 AC108729.2-201ENST00000476543 840 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 RN7SL30P-201ENST00000488416 306 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN2P57739 HMGB1P3-201ENST00000502802 616 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN2P57739 AC024558.1-201ENST00000505008 528 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN2P57739 OR5M14P-201ENST00000506803 618 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CLDN2P57739 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN2P57739 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.53□□□□□ -1.52
CLDN2P57739 AC139697.1-201ENST00000548429 745 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN2P57739 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN2P57739 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN2P57739 MIR4311-201ENST00000580794 100 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CLDN2P57739 AC005242.1-201ENST00000585658 438 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 AC015911.5-201ENST00000587076 451 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 AC006115.2-201ENST00000596823 202 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN2P57739 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.53□□□□□ -1.52
CLDN2P57739 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN2P57739 AL133481.2-203ENST00000607558 139 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 AC000068.2-201ENST00000608816 460 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 AC008115.4-201ENST00000619780 775 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 AC097460.3-201ENST00000623099 442 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN2P57739 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN2P57739 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLDN2P57739 AL669831.5-218ENST00000591702 1873 ntBASIC5.53□□□□□ -1.52
CLDN2P57739 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.53□□□□□ -1.52
CLDN2P57739 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN2P57739 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLDN2P57739 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN2P57739 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN2P57739 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN2P57739 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CLDN2P57739 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CLDN2P57739 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.53□□□□□ -1.52
CLDN2P57739 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CLDN2P57739 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN2P57739 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CLDN2P57739 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.52□□□□□ -1.53
CLDN2P57739 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms