Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.18□□□□□ -1.58
PKNOX1P55347 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.18□□□□□ -1.58
PKNOX1P55347 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.18□□□□□ -1.58
PKNOX1P55347 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.18□□□□□ -1.58
PKNOX1P55347 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.18□□□□□ -1.58
PKNOX1P55347 AP004607.2-201ENST00000533949 322 ntBASIC5.18□□□□□ -1.58
PKNOX1P55347 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.18□□□□□ -1.58
PKNOX1P55347 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.18□□□□□ -1.58
PKNOX1P55347 AC010547.6-201ENST00000571789 193 ntBASIC5.18□□□□□ -1.58
PKNOX1P55347 AC134669.1-201ENST00000581275 672 ntBASIC5.18□□□□□ -1.58
PKNOX1P55347 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.18□□□□□ -1.58
PKNOX1P55347 AC100778.3-201ENST00000580060 1750 ntBASIC5.18□□□□□ -1.58
PKNOX1P55347 AC023421.1-201ENST00000590535 1785 ntBASIC5.18□□□□□ -1.58
PKNOX1P55347 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PKNOX1P55347 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
PKNOX1P55347 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.18□□□□□ -1.58
PKNOX1P55347 DDX18P6-201ENST00000450119 1997 ntBASIC5.18□□□□□ -1.58
PKNOX1P55347 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.18□□□□□ -1.58
PKNOX1P55347 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PKNOX1P55347 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.17□□□□□ -1.58
PKNOX1P55347 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.17□□□□□ -1.58
PKNOX1P55347 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PKNOX1P55347 MUC2-202ENST00000613187 4845 ntBASIC5.17□□□□□ -1.58
PKNOX1P55347 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PKNOX1P55347 SMG1P7-201ENST00000565246 2704 ntBASIC5.17□□□□□ -1.58
PKNOX1P55347 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
PKNOX1P55347 LYPLA1P3-201ENST00000402650 695 ntBASIC5.17□□□□□ -1.58
PKNOX1P55347 OR6E1P-201ENST00000414424 923 ntBASIC5.17□□□□□ -1.58
PKNOX1P55347 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.17□□□□□ -1.58
PKNOX1P55347 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.17□□□□□ -1.58
PKNOX1P55347 TNPO1P1-201ENST00000423641 1138 ntBASIC5.17□□□□□ -1.58
PKNOX1P55347 PRUNEP1-201ENST00000425846 705 ntBASIC5.17□□□□□ -1.58
PKNOX1P55347 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.17□□□□□ -1.58
PKNOX1P55347 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.17□□□□□ -1.58
PKNOX1P55347 AC002504.1-201ENST00000438281 691 ntBASIC5.17□□□□□ -1.58
PKNOX1P55347 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.17□□□□□ -1.58
PKNOX1P55347 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.17□□□□□ -1.58
PKNOX1P55347 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.17□□□□□ -1.58
PKNOX1P55347 RN7SL423P-201ENST00000486202 304 ntBASIC5.17□□□□□ -1.58
PKNOX1P55347 RN7SKP5-201ENST00000517045 272 ntBASIC5.17□□□□□ -1.58
PKNOX1P55347 IGKV2-4-201ENST00000523070 340 ntBASIC5.17□□□□□ -1.58
PKNOX1P55347 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.17□□□□□ -1.58
PKNOX1P55347 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.17□□□□□ -1.58
PKNOX1P55347 AC006349.1-201ENST00000555526 235 ntBASIC5.17□□□□□ -1.58
PKNOX1P55347 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.17□□□□□ -1.58
PKNOX1P55347 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.17□□□□□ -1.58
PKNOX1P55347 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.17□□□□□ -1.58
PKNOX1P55347 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.17□□□□□ -1.58
PKNOX1P55347 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.17□□□□□ -1.58
PKNOX1P55347 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.17□□□□□ -1.58
PKNOX1P55347 AC005252.1-201ENST00000604518 1063 ntBASIC5.17□□□□□ -1.58
PKNOX1P55347 AC009597.2-201ENST00000604659 592 ntBASIC5.17□□□□□ -1.58
PKNOX1P55347 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.17□□□□□ -1.58
PKNOX1P55347 AC138627.1-204ENST00000641894 765 ntBASIC5.17□□□□□ -1.58
PKNOX1P55347 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PKNOX1P55347 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.17□□□□□ -1.58
PKNOX1P55347 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PKNOX1P55347 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.17□□□□□ -1.58
PKNOX1P55347 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.17□□□□□ -1.58
PKNOX1P55347 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PKNOX1P55347 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PKNOX1P55347 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.17□□□□□ -1.58
PKNOX1P55347 AC093591.2-201ENST00000565254 3843 ntBASIC5.17□□□□□ -1.58
PKNOX1P55347 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PKNOX1P55347 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PKNOX1P55347 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PKNOX1P55347 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
PKNOX1P55347 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PKNOX1P55347 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.16□□□□□ -1.58
PKNOX1P55347 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.16□□□□□ -1.58
PKNOX1P55347 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.16□□□□□ -1.58
PKNOX1P55347 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PKNOX1P55347 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PKNOX1P55347 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PKNOX1P55347 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.16□□□□□ -1.58
PKNOX1P55347 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PKNOX1P55347 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PKNOX1P55347 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PKNOX1P55347 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PKNOX1P55347 RNU6-167P-201ENST00000384292 106 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 AC002524.1-201ENST00000411687 547 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.16□□□□□ -1.58
PKNOX1P55347 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.16□□□□□ -1.58
PKNOX1P55347 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
PKNOX1P55347 AC046176.1-201ENST00000435260 1170 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 SUMO2P3-201ENST00000438311 288 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 GAPDHP58-201ENST00000438477 1006 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.16□□□□□ -1.58
PKNOX1P55347 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PKNOX1P55347 AC058823.1-201ENST00000485315 474 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.16□□□□□ -1.58
PKNOX1P55347 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.16□□□□□ -1.58
PKNOX1P55347 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.16□□□□□ -1.58
PKNOX1P55347 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.16□□□□□ -1.58
PKNOX1P55347 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.16□□□□□ -1.58
PKNOX1P55347 AC015720.2-201ENST00000567709 334 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 ADAM3B-201ENST00000569937 840 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 AC022884.2-201ENST00000578535 580 ntBASIC5.16□□□□□ -1.58
PKNOX1P55347 MIR4472-2-201ENST00000582069 67 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms