Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF144AP50876 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RNF144AP50876 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RNF144AP50876 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RNF144AP50876 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 Y_RNA.146-201ENST00000363549 102 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 SNORA33.2-201ENST00000365413 134 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
RNF144AP50876 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 Y_RNA.401-201ENST00000383965 117 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 RNU6-196P-201ENST00000384315 107 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 SNORA70I-201ENST00000384544 135 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
RNF144AP50876 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF144AP50876 TXNP7-201ENST00000406296 293 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 RN7SKP261-201ENST00000410948 278 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 AL450992.3-201ENST00000413192 568 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 AL139128.1-201ENST00000413921 941 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 AC004986.1-201ENST00000414855 607 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 AC092042.2-201ENST00000417304 331 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 OR1AA1P-201ENST00000419597 916 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 AC006457.1-201ENST00000420733 392 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC7.11□□□□□ -1.27
RNF144AP50876 AL353193.1-201ENST00000421444 268 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC7.11□□□□□ -1.27
RNF144AP50876 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF144AP50876 AC027124.1-201ENST00000440852 466 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 AC015983.1-201ENST00000441577 373 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.11□□□□□ -1.27
RNF144AP50876 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.11□□□□□ -1.27
RNF144AP50876 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF144AP50876 RPS4XP19-201ENST00000460237 736 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
RNF144AP50876 RN7SL608P-201ENST00000492377 279 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 RN7SL388P-201ENST00000498736 339 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF144AP50876 AC113352.1-201ENST00000513196 666 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 RNU6-1170P-201ENST00000515974 106 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 RNA5SP422-201ENST00000516778 111 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 RNU6-794P-201ENST00000517261 64 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF144AP50876 PHBP17-201ENST00000528576 541 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 AP000790.1-201ENST00000528891 737 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 AL121594.2-201ENST00000541658 472 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF144AP50876 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF144AP50876 AC093063.1-201ENST00000599317 363 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 AL355598.1-201ENST00000604169 202 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF144AP50876 AL137000.1-201ENST00000610528 1244 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 AC008957.2-201ENST00000618632 396 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF144AP50876 C2orf27A-204ENST00000623058 969 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF144AP50876 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.11□□□□□ -1.27
RNF144AP50876 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
RNF144AP50876 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
RNF144AP50876 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 RLIMP2-201ENST00000427891 1563 ntBASIC7.11□□□□□ -1.27
RNF144AP50876 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
RNF144AP50876 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF144AP50876 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF144AP50876 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
RNF144AP50876 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF144AP50876 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC7.1□□□□□ -1.27
RNF144AP50876 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RNF144AP50876 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RNF144AP50876 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF144AP50876 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF144AP50876 IL15-207ENST00000514653 1388 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF144AP50876 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RNF144AP50876 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RNF144AP50876 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF144AP50876 AC090771.1-201ENST00000585803 1618 ntBASIC7.1□□□□□ -1.27
RNF144AP50876 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF144AP50876 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF144AP50876 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF144AP50876 RNU6-474P-201ENST00000384243 107 ntBASIC7.1□□□□□ -1.27
RNF144AP50876 RNA5SP23-201ENST00000391006 105 ntBASIC7.1□□□□□ -1.27
RNF144AP50876 RFKP1-201ENST00000400940 428 ntBASIC7.1□□□□□ -1.27
RNF144AP50876 RN7SKP29-201ENST00000410957 272 ntBASIC7.1□□□□□ -1.27
RNF144AP50876 RNU6-373P-201ENST00000411247 98 ntBASIC7.1□□□□□ -1.27
RNF144AP50876 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF144AP50876 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC7.1□□□□□ -1.27
RNF144AP50876 TMBIM7P-201ENST00000418074 855 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms