Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SRP9P49458 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
SRP9P49458 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SRP9P49458 AC104623.2-202ENST00000623477 4002 ntBASIC4.76□□□□□ -1.65
SRP9P49458 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SRP9P49458 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.76□□□□□ -1.65
SRP9P49458 MIR323A-201ENST00000362199 86 ntBASIC4.76□□□□□ -1.65
SRP9P49458 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SRP9P49458 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SRP9P49458 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.76□□□□□ -1.65
SRP9P49458 SNORA11.3-201ENST00000408471 128 ntBASIC4.76□□□□□ -1.65
SRP9P49458 RPSAP35-201ENST00000413753 818 ntBASIC4.76□□□□□ -1.65
SRP9P49458 CDY17P-201ENST00000414121 1282 ntBASIC4.76□□□□□ -1.65
SRP9P49458 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.76□□□□□ -1.65
SRP9P49458 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.76□□□□□ -1.65
SRP9P49458 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.76□□□□□ -1.65
SRP9P49458 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SRP9P49458 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.76□□□□□ -1.65
SRP9P49458 PRUNEP1-201ENST00000425846 705 ntBASIC4.76□□□□□ -1.65
SRP9P49458 RPL19P16-201ENST00000433839 588 ntBASIC4.76□□□□□ -1.65
SRP9P49458 AL591363.1-201ENST00000450091 483 ntBASIC4.76□□□□□ -1.65
SRP9P49458 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
SRP9P49458 NPM1P29-201ENST00000483112 803 ntBASIC4.76□□□□□ -1.65
SRP9P49458 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.76□□□□□ -1.65
SRP9P49458 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.76□□□□□ -1.65
SRP9P49458 AC138866.2-201ENST00000508650 584 ntBASIC4.76□□□□□ -1.65
SRP9P49458 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.76□□□□□ -1.65
SRP9P49458 HMGN1P9-201ENST00000515212 298 ntBASIC4.76□□□□□ -1.65
SRP9P49458 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.76□□□□□ -1.65
SRP9P49458 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.76□□□□□ -1.65
SRP9P49458 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.76□□□□□ -1.65
SRP9P49458 AC022404.1-201ENST00000555320 273 ntBASIC4.76□□□□□ -1.65
SRP9P49458 AC127381.1-201ENST00000555979 939 ntBASIC4.76□□□□□ -1.65
SRP9P49458 AC135626.1-201ENST00000556983 435 ntBASIC4.76□□□□□ -1.65
SRP9P49458 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.76□□□□□ -1.65
SRP9P49458 MRPS21P7-201ENST00000566937 238 ntBASIC4.76□□□□□ -1.65
SRP9P49458 MIR3614-201ENST00000581261 86 ntBASIC4.76□□□□□ -1.65
SRP9P49458 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.76□□□□□ -1.65
SRP9P49458 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.76□□□□□ -1.65
SRP9P49458 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.76□□□□□ -1.65
SRP9P49458 PPATP2-201ENST00000605635 508 ntBASIC4.76□□□□□ -1.65
SRP9P49458 AL356608.1-201ENST00000610034 820 ntBASIC4.76□□□□□ -1.65
SRP9P49458 RN7SL787P-201ENST00000613000 284 ntBASIC4.76□□□□□ -1.65
SRP9P49458 AC073575.2-201ENST00000614212 627 ntBASIC4.76□□□□□ -1.65
SRP9P49458 SNORA11.6-201ENST00000619030 128 ntBASIC4.76□□□□□ -1.65
SRP9P49458 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SRP9P49458 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.76□□□□□ -1.65
SRP9P49458 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.76□□□□□ -1.65
SRP9P49458 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SRP9P49458 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SRP9P49458 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SRP9P49458 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.76□□□□□ -1.65
SRP9P49458 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.75□□□□□ -1.65
SRP9P49458 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SRP9P49458 SMG1P4-204ENST00000523028 4131 ntBASIC4.75□□□□□ -1.65
SRP9P49458 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SRP9P49458 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SRP9P49458 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SRP9P49458 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SRP9P49458 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SRP9P49458 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SRP9P49458 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SRP9P49458 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SRP9P49458 SNORD56.6-201ENST00000384569 71 ntBASIC4.75□□□□□ -1.65
SRP9P49458 AC233289.1-201ENST00000403700 508 ntBASIC4.75□□□□□ -1.65
SRP9P49458 RNU2-22P-201ENST00000411266 212 ntBASIC4.75□□□□□ -1.65
SRP9P49458 RN7SKP293-201ENST00000411389 296 ntBASIC4.75□□□□□ -1.65
SRP9P49458 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.75□□□□□ -1.65
SRP9P49458 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SRP9P49458 AL133173.1-201ENST00000423458 397 ntBASIC4.75□□□□□ -1.65
SRP9P49458 RIMKLBP2-201ENST00000424737 654 ntBASIC4.75□□□□□ -1.65
SRP9P49458 HSPD1P12-201ENST00000429127 1069 ntBASIC4.75□□□□□ -1.65
SRP9P49458 AL389925.1-201ENST00000432257 728 ntBASIC4.75□□□□□ -1.65
SRP9P49458 SUMO2P3-201ENST00000438311 288 ntBASIC4.75□□□□□ -1.65
SRP9P49458 AL450263.2-201ENST00000439400 589 ntBASIC4.75□□□□□ -1.65
SRP9P49458 SETP20-201ENST00000457046 852 ntBASIC4.75□□□□□ -1.65
SRP9P49458 RN7SL273P-201ENST00000481561 299 ntBASIC4.75□□□□□ -1.65
SRP9P49458 AC104109.1-201ENST00000498563 436 ntBASIC4.75□□□□□ -1.65
SRP9P49458 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.75□□□□□ -1.65
SRP9P49458 EIF3KP3-201ENST00000514461 639 ntBASIC4.75□□□□□ -1.65
SRP9P49458 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.75□□□□□ -1.65
SRP9P49458 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.75□□□□□ -1.65
SRP9P49458 AC100784.1-201ENST00000522790 310 ntBASIC4.75□□□□□ -1.65
SRP9P49458 AC027544.3-201ENST00000535082 757 ntBASIC4.75□□□□□ -1.65
SRP9P49458 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.75□□□□□ -1.65
SRP9P49458 HSPE1P2-201ENST00000554777 306 ntBASIC4.75□□□□□ -1.65
SRP9P49458 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.75□□□□□ -1.65
SRP9P49458 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.75□□□□□ -1.65
SRP9P49458 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.75□□□□□ -1.65
SRP9P49458 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.75□□□□□ -1.65
SRP9P49458 FO393422.1-201ENST00000603908 708 ntBASIC4.75□□□□□ -1.65
SRP9P49458 CU639417.4-201ENST00000623928 207 ntBASIC4.75□□□□□ -1.65
SRP9P49458 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.75□□□□□ -1.65
SRP9P49458 AC008691.1-209ENST00000642094 814 ntBASIC4.75□□□□□ -1.65
SRP9P49458 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SRP9P49458 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.75□□□□□ -1.65
SRP9P49458 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SRP9P49458 KARSP1-201ENST00000451871 1752 ntBASIC4.75□□□□□ -1.65
SRP9P49458 CASC19-221ENST00000641309 1382 ntBASIC4.75□□□□□ -1.65
SRP9P49458 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms