Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.8□□□□□ -1.64
CSNK1A1P48729 HMGN1P9-201ENST00000515212 298 ntBASIC4.8□□□□□ -1.64
CSNK1A1P48729 SCARNA20.4-201ENST00000516969 131 ntBASIC4.8□□□□□ -1.64
CSNK1A1P48729 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.8□□□□□ -1.64
CSNK1A1P48729 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.8□□□□□ -1.64
CSNK1A1P48729 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.8□□□□□ -1.64
CSNK1A1P48729 OR8G3P-201ENST00000533406 921 ntBASIC4.8□□□□□ -1.64
CSNK1A1P48729 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.8□□□□□ -1.64
CSNK1A1P48729 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.8□□□□□ -1.64
CSNK1A1P48729 RN7SL356P-201ENST00000582228 248 ntBASIC4.8□□□□□ -1.64
CSNK1A1P48729 AC006272.2-201ENST00000594725 163 ntBASIC4.8□□□□□ -1.64
CSNK1A1P48729 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.8□□□□□ -1.64
CSNK1A1P48729 AC009027.1-201ENST00000604510 479 ntBASIC4.8□□□□□ -1.64
CSNK1A1P48729 AL162574.1-201ENST00000615702 950 ntBASIC4.8□□□□□ -1.64
CSNK1A1P48729 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.8□□□□□ -1.64
CSNK1A1P48729 AC138965.3-201ENST00000623875 498 ntBASIC4.8□□□□□ -1.64
CSNK1A1P48729 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CSNK1A1P48729 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CSNK1A1P48729 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CSNK1A1P48729 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.8□□□□□ -1.64
CSNK1A1P48729 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CSNK1A1P48729 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
CSNK1A1P48729 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.8□□□□□ -1.64
CSNK1A1P48729 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CSNK1A1P48729 AL022322.2-201ENST00000624072 20397 ntBASIC4.8□□□□□ -1.64
CSNK1A1P48729 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CSNK1A1P48729 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CSNK1A1P48729 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSNK1A1P48729 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSNK1A1P48729 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 CASC19-248ENST00000641674 1356 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 AC003973.3-201ENST00000624863 2822 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CSNK1A1P48729 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CSNK1A1P48729 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 KARSP1-201ENST00000451871 1752 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSNK1A1P48729 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CSNK1A1P48729 MIR323A-201ENST00000362199 86 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 SNORA16A-201ENST00000384342 137 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 DBIP1-201ENST00000401435 260 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 RANP1-206ENST00000455094 651 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 SETP20-201ENST00000457046 852 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 RPSAP39-201ENST00000467439 883 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 AP000797.2-201ENST00000475768 606 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 RN7SL717P-201ENST00000478343 297 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 OR11I1P-201ENST00000486033 954 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 EIF1P7-201ENST00000487533 337 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 RPL7P51-201ENST00000490532 749 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 SEPT10P1-201ENST00000517342 1162 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 CDC42P3-201ENST00000518493 633 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 OR11H3P-201ENST00000554547 982 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 AC108738.1-201ENST00000603703 237 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 QTRT1P1-201ENST00000604344 1078 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 AC010245.2-201ENST00000606908 1167 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 AC244107.2-201ENST00000611773 76 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 AC004477.3-201ENST00000614061 590 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 AC109583.2-201ENST00000617367 129 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 MIR8080-201ENST00000622224 89 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 AC135068.5-201ENST00000624197 983 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSNK1A1P48729 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CSNK1A1P48729 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CSNK1A1P48729 TTC39DP-201ENST00000416781 1688 ntBASIC4.79□□□□□ -1.64
CSNK1A1P48729 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSNK1A1P48729 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CSNK1A1P48729 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CSNK1A1P48729 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.79□□□□□ -1.64
CSNK1A1P48729 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSNK1A1P48729 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.78□□□□□ -1.64
CSNK1A1P48729 RNU1-19P-201ENST00000363306 165 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 RNA5SP234-201ENST00000363916 119 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 HSPA8P15-201ENST00000401676 786 ntBASIC4.78□□□□□ -1.64
CSNK1A1P48729 AL391422.1-201ENST00000402155 436 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms