Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BRCC3P46736 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BRCC3P46736 RNA5SP305-201ENST00000362665 119 ntBASIC5.65□□□□□ -1.5
BRCC3P46736 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
BRCC3P46736 RN7SKP125-201ENST00000410481 302 ntBASIC5.65□□□□□ -1.5
BRCC3P46736 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.65□□□□□ -1.5
BRCC3P46736 EI24P4-201ENST00000423683 1078 ntBASIC5.65□□□□□ -1.5
BRCC3P46736 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BRCC3P46736 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.65□□□□□ -1.5
BRCC3P46736 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.65□□□□□ -1.5
BRCC3P46736 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BRCC3P46736 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.65□□□□□ -1.5
BRCC3P46736 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.65□□□□□ -1.5
BRCC3P46736 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.65□□□□□ -1.5
BRCC3P46736 EIF3KP3-201ENST00000514461 639 ntBASIC5.65□□□□□ -1.5
BRCC3P46736 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.65□□□□□ -1.5
BRCC3P46736 EIF4EP5-201ENST00000528228 640 ntBASIC5.65□□□□□ -1.5
BRCC3P46736 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.65□□□□□ -1.5
BRCC3P46736 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
BRCC3P46736 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.65□□□□□ -1.5
BRCC3P46736 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
BRCC3P46736 AC125494.2-201ENST00000602431 657 ntBASIC5.65□□□□□ -1.5
BRCC3P46736 AL139124.1-201ENST00000609123 421 ntBASIC5.65□□□□□ -1.5
BRCC3P46736 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.65□□□□□ -1.5
BRCC3P46736 AC099494.2-201ENST00000623371 978 ntBASIC5.65□□□□□ -1.5
BRCC3P46736 AP002799.1-201ENST00000623552 423 ntBASIC5.65□□□□□ -1.5
BRCC3P46736 AP003400.3-201ENST00000624904 346 ntBASIC5.65□□□□□ -1.5
BRCC3P46736 AC099654.6-201ENST00000636487 512 ntBASIC5.65□□□□□ -1.5
BRCC3P46736 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.65□□□□□ -1.51
BRCC3P46736 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.65□□□□□ -1.51
BRCC3P46736 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BRCC3P46736 AC016745.2-201ENST00000608834 3443 ntBASIC5.65□□□□□ -1.51
BRCC3P46736 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BRCC3P46736 AC123912.3-201ENST00000600907 1367 ntBASIC5.65□□□□□ -1.51
BRCC3P46736 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
BRCC3P46736 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BRCC3P46736 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
BRCC3P46736 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.65□□□□□ -1.51
BRCC3P46736 AC073429.2-201ENST00000569694 1444 ntBASIC5.65□□□□□ -1.51
BRCC3P46736 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
BRCC3P46736 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
BRCC3P46736 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
BRCC3P46736 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
BRCC3P46736 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 U3.3-201ENST00000362986 216 ntBASIC5.64□□□□□ -1.51
BRCC3P46736 RNU4-4P-201ENST00000364588 130 ntBASIC5.64□□□□□ -1.51
BRCC3P46736 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.64□□□□□ -1.51
BRCC3P46736 MIR600-201ENST00000385007 98 ntBASIC5.64□□□□□ -1.51
BRCC3P46736 TRAV35-201ENST00000390462 330 ntBASIC5.64□□□□□ -1.51
BRCC3P46736 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
BRCC3P46736 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.64□□□□□ -1.51
BRCC3P46736 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.64□□□□□ -1.51
BRCC3P46736 AC083899.1-201ENST00000454465 3819 ntBASIC5.64□□□□□ -1.51
BRCC3P46736 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.64□□□□□ -1.51
BRCC3P46736 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.64□□□□□ -1.51
BRCC3P46736 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.64□□□□□ -1.51
BRCC3P46736 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.64□□□□□ -1.51
BRCC3P46736 OR4A17P-201ENST00000526032 904 ntBASIC5.64□□□□□ -1.51
BRCC3P46736 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 HMGN2P47-201ENST00000559378 272 ntBASIC5.64□□□□□ -1.51
BRCC3P46736 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 OR1F2P-201ENST00000570470 933 ntBASIC5.64□□□□□ -1.51
BRCC3P46736 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.64□□□□□ -1.51
BRCC3P46736 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.64□□□□□ -1.51
BRCC3P46736 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
BRCC3P46736 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 HSPA8P18-201ENST00000439846 1928 ntBASIC5.64□□□□□ -1.51
BRCC3P46736 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRCC3P46736 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.64□□□□□ -1.51
BRCC3P46736 PANDAR-201ENST00000629595 1506 ntBASIC5.64□□□□□ -1.51
BRCC3P46736 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BRCC3P46736 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRCC3P46736 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
BRCC3P46736 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRCC3P46736 AL442128.2-201ENST00000620246 1824 ntBASIC5.63□□□□□ -1.51
BRCC3P46736 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRCC3P46736 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BRCC3P46736 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRCC3P46736 AC092681.1-201ENST00000297369 291 ntBASIC5.63□□□□□ -1.51
BRCC3P46736 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 1360.1 ms