Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.24□□□□□ -1.41
SCN4AP35499 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC6.24□□□□□ -1.41
SCN4AP35499 OR52J1P-201ENST00000450596 932 ntBASIC6.24□□□□□ -1.41
SCN4AP35499 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.24□□□□□ -1.41
SCN4AP35499 snoU13.1-201ENST00000459157 104 ntBASIC6.24□□□□□ -1.41
SCN4AP35499 RPL7P40-201ENST00000481703 745 ntBASIC6.24□□□□□ -1.41
SCN4AP35499 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.24□□□□□ -1.41
SCN4AP35499 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.24□□□□□ -1.41
SCN4AP35499 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.24□□□□□ -1.41
SCN4AP35499 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.24□□□□□ -1.41
SCN4AP35499 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.24□□□□□ -1.41
SCN4AP35499 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.24□□□□□ -1.41
SCN4AP35499 RPL26P30-202ENST00000602923 645 ntBASIC6.24□□□□□ -1.41
SCN4AP35499 AC011944.2-201ENST00000624440 683 ntBASIC6.24□□□□□ -1.41
SCN4AP35499 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.24□□□□□ -1.41
SCN4AP35499 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SCN4AP35499 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC6.24□□□□□ -1.41
SCN4AP35499 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SCN4AP35499 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
SCN4AP35499 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SCN4AP35499 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SCN4AP35499 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SCN4AP35499 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SCN4AP35499 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SCN4AP35499 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCN4AP35499 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SCN4AP35499 KARSP3-201ENST00000571212 1504 ntBASIC6.23□□□□□ -1.41
SCN4AP35499 AL121977.1-201ENST00000401636 979 ntBASIC6.23□□□□□ -1.41
SCN4AP35499 MIR1193-201ENST00000408109 78 ntBASIC6.23□□□□□ -1.41
SCN4AP35499 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.23□□□□□ -1.41
SCN4AP35499 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.23□□□□□ -1.41
SCN4AP35499 RN7SL188P-201ENST00000469842 285 ntBASIC6.23□□□□□ -1.41
SCN4AP35499 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.23□□□□□ -1.41
SCN4AP35499 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.23□□□□□ -1.41
SCN4AP35499 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.23□□□□□ -1.41
SCN4AP35499 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.23□□□□□ -1.41
SCN4AP35499 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.23□□□□□ -1.41
SCN4AP35499 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.23□□□□□ -1.41
SCN4AP35499 AC233699.1-201ENST00000569955 1168 ntBASIC6.23□□□□□ -1.41
SCN4AP35499 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SCN4AP35499 AP001357.1-201ENST00000586304 1053 ntBASIC6.23□□□□□ -1.41
SCN4AP35499 AL590392.1-201ENST00000604960 446 ntBASIC6.23□□□□□ -1.41
SCN4AP35499 AC010857.1-201ENST00000606398 594 ntBASIC6.23□□□□□ -1.41
SCN4AP35499 CR381572.2-201ENST00000624852 397 ntBASIC6.23□□□□□ -1.41
SCN4AP35499 OR52H1-202ENST00000641796 1061 ntBASIC6.23□□□□□ -1.41
SCN4AP35499 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.23□□□□□ -1.41
SCN4AP35499 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SCN4AP35499 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCN4AP35499 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SCN4AP35499 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCN4AP35499 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCN4AP35499 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCN4AP35499 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SCN4AP35499 AC006206.1-201ENST00000544842 3387 ntBASIC6.23□□□□□ -1.41
SCN4AP35499 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SCN4AP35499 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
SCN4AP35499 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN4AP35499 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SCN4AP35499 AC096921.1-201ENST00000411661 375 ntBASIC6.22□□□□□ -1.41
SCN4AP35499 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.22□□□□□ -1.41
SCN4AP35499 CYP4F29P-201ENST00000420685 446 ntBASIC6.22□□□□□ -1.41
SCN4AP35499 OR10T1P-201ENST00000424327 947 ntBASIC6.22□□□□□ -1.41
SCN4AP35499 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.22□□□□□ -1.41
SCN4AP35499 SLC25A15P5-201ENST00000508033 253 ntBASIC6.22□□□□□ -1.41
SCN4AP35499 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.22□□□□□ -1.41
SCN4AP35499 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.22□□□□□ -1.41
SCN4AP35499 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.22□□□□□ -1.41
SCN4AP35499 BNIP3P5-201ENST00000562290 498 ntBASIC6.22□□□□□ -1.41
SCN4AP35499 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.22□□□□□ -1.41
SCN4AP35499 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.22□□□□□ -1.41
SCN4AP35499 TVP23CP2-201ENST00000571473 623 ntBASIC6.22□□□□□ -1.41
SCN4AP35499 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.22□□□□□ -1.41
SCN4AP35499 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN4AP35499 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN4AP35499 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN4AP35499 AP000641.1-201ENST00000531988 1639 ntBASIC6.22□□□□□ -1.41
SCN4AP35499 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN4AP35499 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN4AP35499 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.22□□□□□ -1.41
SCN4AP35499 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN4AP35499 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SCN4AP35499 NUDT19P3-201ENST00000404698 555 ntBASIC6.22□□□□□ -1.41
SCN4AP35499 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.22□□□□□ -1.41
SCN4AP35499 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.22□□□□□ -1.41
SCN4AP35499 KRT8P51-201ENST00000438938 274 ntBASIC6.22□□□□□ -1.41
SCN4AP35499 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.22□□□□□ -1.41
SCN4AP35499 AC013356.1-201ENST00000489027 564 ntBASIC6.22□□□□□ -1.41
SCN4AP35499 AC135068.12-201ENST00000637370 931 ntBASIC6.22□□□□□ -1.41
SCN4AP35499 CCAT2-201ENST00000630920 1752 ntBASIC6.22□□□□□ -1.41
SCN4AP35499 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.22□□□□□ -1.41
SCN4AP35499 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN4AP35499 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SCN4AP35499 AC007998.4-201ENST00000612496 2533 ntBASIC6.22□□□□□ -1.41
SCN4AP35499 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SCN4AP35499 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SCN4AP35499 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.41
SCN4AP35499 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SCN4AP35499 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.21□□□□□ -1.41
SCN4AP35499 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
SCN4AP35499 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms