Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 HMGN1P8-201ENST00000463578 288 ntBASIC6.18□□□□□ -1.42
CIITAP33076 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.18□□□□□ -1.42
CIITAP33076 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.18□□□□□ -1.42
CIITAP33076 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CIITAP33076 AC008126.1-201ENST00000549019 480 ntBASIC6.18□□□□□ -1.42
CIITAP33076 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CIITAP33076 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
CIITAP33076 AL049874.4-201ENST00000557593 255 ntBASIC6.18□□□□□ -1.42
CIITAP33076 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.18□□□□□ -1.42
CIITAP33076 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.18□□□□□ -1.42
CIITAP33076 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CIITAP33076 AL359715.3-201ENST00000569267 2123 ntBASIC6.18□□□□□ -1.42
CIITAP33076 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CIITAP33076 MIR4489-201ENST00000578869 62 ntBASIC6.18□□□□□ -1.42
CIITAP33076 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.18□□□□□ -1.42
CIITAP33076 FKBP1AP1-201ENST00000594588 318 ntBASIC6.18□□□□□ -1.42
CIITAP33076 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.18□□□□□ -1.42
CIITAP33076 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CIITAP33076 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CIITAP33076 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CIITAP33076 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CIITAP33076 AC073869.8-201ENST00000641806 335 ntBASIC6.18□□□□□ -1.42
CIITAP33076 CASC19-264ENST00000641912 1184 ntBASIC6.18□□□□□ -1.42
CIITAP33076 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CIITAP33076 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CIITAP33076 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CIITAP33076 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.18□□□□□ -1.42
CIITAP33076 AC140134.1-201ENST00000511830 3544 ntBASIC6.18□□□□□ -1.42
CIITAP33076 CIR1P2-201ENST00000514821 1342 ntBASIC6.18□□□□□ -1.42
CIITAP33076 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.18□□□□□ -1.42
CIITAP33076 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.18□□□□□ -1.42
CIITAP33076 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CIITAP33076 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CIITAP33076 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CIITAP33076 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CIITAP33076 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CIITAP33076 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.17□□□□□ -1.42
CIITAP33076 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CIITAP33076 Z83820.1-201ENST00000456978 1499 ntBASIC6.17□□□□□ -1.42
CIITAP33076 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CIITAP33076 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CIITAP33076 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.17□□□□□ -1.42
CIITAP33076 RN7SKP185-201ENST00000362813 326 ntBASIC6.17□□□□□ -1.42
CIITAP33076 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CIITAP33076 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.17□□□□□ -1.42
CIITAP33076 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.17□□□□□ -1.42
CIITAP33076 RPL17P35-201ENST00000432217 549 ntBASIC6.17□□□□□ -1.42
CIITAP33076 HSFY7P-201ENST00000432672 318 ntBASIC6.17□□□□□ -1.42
CIITAP33076 HSFY8P-201ENST00000437934 318 ntBASIC6.17□□□□□ -1.42
CIITAP33076 AC073465.2-201ENST00000440938 498 ntBASIC6.17□□□□□ -1.42
CIITAP33076 HSFY5P-201ENST00000453726 309 ntBASIC6.17□□□□□ -1.42
CIITAP33076 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.17□□□□□ -1.42
CIITAP33076 PSAT1P4-201ENST00000466500 526 ntBASIC6.17□□□□□ -1.42
CIITAP33076 COPS8P2-201ENST00000473228 627 ntBASIC6.17□□□□□ -1.42
CIITAP33076 AC093827.1-201ENST00000480094 861 ntBASIC6.17□□□□□ -1.42
CIITAP33076 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.17□□□□□ -1.42
CIITAP33076 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.17□□□□□ -1.42
CIITAP33076 RN7SKP99-201ENST00000517028 307 ntBASIC6.17□□□□□ -1.42
CIITAP33076 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.17□□□□□ -1.42
CIITAP33076 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.17□□□□□ -1.42
CIITAP33076 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.17□□□□□ -1.42
CIITAP33076 OR8Q1P-201ENST00000526467 655 ntBASIC6.17□□□□□ -1.42
CIITAP33076 AC027026.1-201ENST00000532323 742 ntBASIC6.17□□□□□ -1.42
CIITAP33076 AC090022.1-201ENST00000546569 311 ntBASIC6.17□□□□□ -1.42
CIITAP33076 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.17□□□□□ -1.42
CIITAP33076 OR11H3P-201ENST00000554547 982 ntBASIC6.17□□□□□ -1.42
CIITAP33076 AC011270.1-201ENST00000558606 583 ntBASIC6.17□□□□□ -1.42
CIITAP33076 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CIITAP33076 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.17□□□□□ -1.42
CIITAP33076 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.17□□□□□ -1.42
CIITAP33076 AC125494.2-201ENST00000602431 657 ntBASIC6.17□□□□□ -1.42
CIITAP33076 AC117490.2-201ENST00000610042 594 ntBASIC6.17□□□□□ -1.42
CIITAP33076 AL512624.1-201ENST00000613638 469 ntBASIC6.17□□□□□ -1.42
CIITAP33076 AC135068.5-201ENST00000624197 983 ntBASIC6.17□□□□□ -1.42
CIITAP33076 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.17□□□□□ -1.42
CIITAP33076 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.17□□□□□ -1.42
CIITAP33076 SAMMSON-209ENST00000641222 1100 ntBASIC6.17□□□□□ -1.42
CIITAP33076 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CIITAP33076 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CIITAP33076 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CIITAP33076 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.17□□□□□ -1.42
CIITAP33076 AC005261.6-201ENST00000623072 1387 ntBASIC6.17□□□□□ -1.42
CIITAP33076 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CIITAP33076 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CIITAP33076 AC092111.2-201ENST00000611627 1414 ntBASIC6.16□□□□□ -1.42
CIITAP33076 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.16□□□□□ -1.42
CIITAP33076 AC114774.1-201ENST00000507410 1770 ntBASIC6.16□□□□□ -1.42
CIITAP33076 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.16□□□□□ -1.42
CIITAP33076 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CIITAP33076 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CIITAP33076 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.16□□□□□ -1.42
CIITAP33076 RNA5SP339-201ENST00000390987 122 ntBASIC6.16□□□□□ -1.42
CIITAP33076 DBIP1-201ENST00000401435 260 ntBASIC6.16□□□□□ -1.42
CIITAP33076 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.16□□□□□ -1.42
CIITAP33076 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.16□□□□□ -1.42
CIITAP33076 MTND2P15-201ENST00000418575 892 ntBASIC6.16□□□□□ -1.42
CIITAP33076 AL590623.1-201ENST00000427864 105 ntBASIC6.16□□□□□ -1.42
CIITAP33076 DSTNP5-201ENST00000427921 523 ntBASIC6.16□□□□□ -1.42
CIITAP33076 NDUFB4P8-201ENST00000435351 367 ntBASIC6.16□□□□□ -1.42
CIITAP33076 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms